RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TBCEQ15813 527 aaPredicted RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 ZNF829Q3KNS6 432 aaPredicted RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 DTX2Q86UW9 622 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 OR52H1Q8NGJ2 320 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 AKR7LQ8NHP1 331 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 PLPPR2Q96GM1 343 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CNBD2Q96M20 576 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 SPEF1Q9Y4P9 236 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CASKO14936 926 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 NAA10P41227 235 aaPredicted RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 HTR5AP47898 357 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 UCP2P55851 309 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 RFLNBQ8N5W9 214 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 FOXN4Q96NZ1 517 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 MROQ9BYG7 248 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CGGBP1Q9UFW8 167 aaPredicted RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 SNX5Q9Y5X3 404 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CRYAAP02489 173 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 ETV1P50549 477 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 ZNF83P51522 516 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 RIDAP52758 137 aaKnown RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 TUBA1BP68363 451 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 TUBA4AP68366 448 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 MVKQ03426 396 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 KRT80Q6KB66 452 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 TUBA1AQ71U36 451 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 PAQR4Q8N4S7 273 aaPredicted RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 MARS2Q96GW9 593 aaKnown RBP11.44□□□□□ -0.58
USP44-202ENST00000393091 COPS4Q9BT78 406 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 MYO18BQ8IUG5 2567 aa11.44□□□□□ -0.58
USP44-202ENST00000393091 M0R1B8 84 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 XRCC2O43543 280 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 PATE4P0C8F1 98 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 WFDC8Q8IUA0 241 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 C10orf35Q96D05 121 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 DHRS9Q9BPW9 319 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 ALG8Q9BVK2 526 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 PLEKHF2Q9H8W4 249 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 DAPL1A0PJW8 107 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 M0R135 149 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 PCMT1P22061 227 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 CFL1P23528 166 aaKnown RBP11.43□□□□□ -0.58
USP44-202ENST00000393091 CHN2P52757 468 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 UBE2UQ5VVX9 321 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 C11orf71Q6IPW1 123 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 B3GLCTQ6Y288 498 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 ELMOD2Q8IZ81 293 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 ZNF611Q8N823 705 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 OR5L1Q8NGL2 311 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 TMEM171Q8WVE6 324 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 HTRA1Q92743 480 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 OTULINQ96BN8 352 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 RERGLQ9H628 205 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 POLR1DQ9Y2S0 133 aa11.43□□□□□ -0.58
USP44-202ENST00000393091 HS3ST1O14792 307 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 XPNPEP2O43895 674 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 MRPL3P09001 348 aaKnown RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 H2BFMP0C1H6 154 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 TAS2R43P59537 309 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 PIGFQ07326 219 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 SWI5Q1ZZU3 235 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 KLHL36Q8N4N3 616 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 CDH20Q9HBT6 801 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 EIF3KQ9UBQ5 218 aaKnown RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 ST6GALNAC2Q9UJ37 374 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 USP9XQ93008 2570 aaPredicted RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 RGS10O43665 173 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 IGHV3-13P01766 116 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 KRT8P05787 483 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 RAC2P15153 192 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 IDH3GP51553 393 aaPredicted RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 ZNF773Q6PK81 442 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 TMPRSS11AQ6ZMR5 421 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 C20orf204Q6ZNR8 217 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 ZNF540Q8NDQ6 660 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 BPIFB6Q8NFQ5 453 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 THEM6Q8WUY1 208 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 HAVCR1Q96D42 359 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 PELI1Q96FA3 418 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 JUNBP17275 347 aaPredicted RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 CX3CR1P49238 355 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 HCCSP53701 268 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 DBPQ10586 325 aaPredicted RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 OR8B8Q15620 311 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 ZNF704Q6ZNC4 412 aaPredicted RBP11.42□□□□□ -0.58
USP44-202ENST00000393091 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 OR10H4Q8NGA5 316 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 FCGR1BQ92637 280 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 V9GYS6 101 aa11.42□□□□□ -0.58
USP44-202ENST00000393091 C5orf49A4QMS7 147 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 MT-ND5P03915 603 aa11.41□□□□□ -0.58
USP44-202ENST00000393091 SELEP16581 610 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms