RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PRSS38A1L453 326 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 GATCO43716 136 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 MS4A2Q01362 244 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 CEACAM7Q14002 265 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 PHLDA2Q53GA4 152 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 TRIM61Q5EBN2 209 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 PRSS3P2Q8NHM4 247 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 SLC35B4Q969S0 331 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 OR5D18Q8NGL1 313 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 ABHD4Q8TB40 342 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 USP22Q9UPT9 525 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 NID1P14543 1247 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 CLDN17P56750 224 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 A0A1W2PN81 502 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 CD14P08571 375 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 CHRNA7P36544 502 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 APOBEC1P41238 236 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 CDKN3Q16667 212 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM176BQ3YBM2 270 aaPredicted RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 OR10A7Q8NGE5 316 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 OR5D13Q8NGL4 314 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 GSTO2Q9H4Y5 243 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 TRAV27A0A087WT01 109 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 FAM87AP0C7U9 286 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 BTF3P20290 206 aaKnown RBP13.5□□□□□ -0.25
CCDC50-201ENST00000392455 INHBCP55103 352 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 LRRC15Q8TF66 581 aa13.5□□□□□ -0.25
CCDC50-201ENST00000392455 NME4O00746 187 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 FZD6O60353 706 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 GNG4P50150 75 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 EGR3Q06889 387 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 TAZQ16635 292 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 HAGHQ16775 308 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 Q6ZN92 141 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 PIWIL3Q7Z3Z3 882 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 HSD11B1LQ7Z5J1 315 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 OR5AP2Q8NGF4 316 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM40Q8WWA1 233 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 AMMECR1Q9Y4X0 333 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 KCNJ10P78508 379 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CALHM3Q86XJ0 350 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF687Q8N1G0 1237 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 XRCC2O43543 280 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 RAB38P57729 211 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 UBE2MP61081 183 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ERV3-1Q14264 604 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ING1Q9UK53 422 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CDC14CA4D256 554 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 G3V3Y1 287 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 PTGESO14684 152 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CRXO43186 299 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 GGTA1PQ4G0N0 100 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 MARCH8Q5T0T0 291 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM182Q6ZP80 229 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 LSM2Q9Y333 95 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 DUS4LO95620 317 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 RPL30P62888 115 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 STUMQ69YW2 141 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 TMEM191AQ9H0A3 160 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF835Q9Y2P0 537 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CDRT15L2A8MXV6 281 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 HTR6P50406 440 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 FCN2Q15485 313 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 GHSRQ92847 366 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 SLC25A46Q96AG3 418 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ADAT1Q9BUB4 502 aaKnown RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 CLMPQ9H6B4 373 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 DOCK7Q96N67 2140 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 AQP7P3A6NL99 342 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 MMP15P51511 669 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 GNB2P62879 340 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 PNLIPRP3Q17RR3 467 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 HSF5Q4G112 596 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 ZNF468Q5VIY5 522 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 DPPA4Q7L190 304 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 LRRTM3Q86VH5 581 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 COL25A1Q9BXS0 654 aaPredicted RBP13.49□□□□□ -0.25
CCDC50-201ENST00000392455 SLC45A2Q9UMX9 530 aa13.49□□□□□ -0.25
CCDC50-201ENST00000392455 G3V2L1 256 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TFAP2AP05549 437 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TNFRSF17Q02223 184 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 B3GNT8Q7Z7M8 397 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SIAH3Q8IW03 269 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 MOB3AQ96BX8 217 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 OCIAD1Q9NX40 245 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TCFL5Q9UL49 500 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 PRICKLE3O43900 615 aaPredicted RBP13.48□□□□□ -0.25
CCDC50-201ENST00000392455 SEMA7AO75326 666 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 GYPBP06028 91 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 TTC32Q5I0X7 151 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 ZDHHC16Q969W1 377 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 M0QZQ0 153 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 PRRG2O14669 202 aa13.48□□□□□ -0.25
CCDC50-201ENST00000392455 HMGN2P05204 90 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms