RNA–Protein interactions for RNA: ENST00000389857.10

CCDC88C-204, Transcript of coiled-coil domain containing 88C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC88C, Length 7,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88C-204ENST00000389857 TNFSF11O14788 317 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 S100A8P05109 93 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 CD22P20273 847 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 FCGR2CP31995 323 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 TAGLNQ01995 201 aaKnown RBP11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 OR13D1Q8NGV5 346 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 SLC5A6Q9Y289 635 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 ANKRD61A6NGH8 418 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 CLN3Q13286 438 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 Q1RN00 199 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 TMEM81Q6P7N7 255 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 DDOQ99489 341 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 NCBP2LA6PVI3 153 aaKnown RBP11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 CD1EP15812 388 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 IRS1P35568 1242 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 SYT14P1Q58G82 188 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 Q6ZSR9 355 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 PDXPQ96GD0 296 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 ZNF727A8MUV8 499 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 DAPP1Q9UN19 280 aa11.65□□□□□ -0.54
CCDC88C-204ENST00000389857 HOXC11O43248 304 aaPredicted RBP11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 CPN1P15169 458 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 H3F3AP84243 136 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 KCNAB1Q14722 419 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 ZNF787Q6DD87 383 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 ASB13Q8WXK3 278 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 SLC39A7Q92504 469 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 FYTTD1Q96QD9 318 aaKnown RBP11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 SYT11Q9BT88 431 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 NRSN2Q9GZP1 204 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 R4GMQ9 66 aa11.65□□□□□ -0.55
CCDC88C-204ENST00000389857 HIST1H1CP16403 213 aaKnown RBP11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PDZK1IP1Q13113 114 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ARSGQ96EG1 525 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 C10orf90Q96M02 699 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 SDF2Q99470 211 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 TCAPO15273 167 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 AMTP48728 403 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PYCR3Q53H96 274 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 MFSD4AQ8N468 514 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ASH2LQ9UBL3 628 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 MAST2Q6P0Q8 1798 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 CRYBA1P05813 215 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ADRB1P08588 477 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 CLEC2LP0C7M8 214 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 NHSL2Q5HYW2 709 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 AFMIDQ63HM1 303 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 C17orf78Q8N4C9 275 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 SLC35B4Q969S0 331 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 FITM1A5D6W6 292 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 HMGN4O00479 90 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 RRASP10301 218 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 AKR1C3P42330 323 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PELI3Q8N2H9 469 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 OR52I2Q8NH67 350 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 SLCO4A1Q96BD0 722 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PARP12Q9H0J9 701 aaKnown RBP11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 C5P01031 1676 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 IGLV3-10A0A075B6K4 115 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 FZD2Q14332 565 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ZNF385BQ569K4 471 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PAQR9Q6ZVX9 377 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 DTWD2Q8NBA8 298 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 HCSTQ9UBK5 93 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ZNF835Q9Y2P0 537 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 WDR1O75083 606 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 POU2F2P09086 479 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 OR2B11Q5JQS5 317 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 ARIH2OSQ8N7S6 290 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
CCDC88C-204ENST00000389857 OR2J3O76001 311 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 TMEM268Q5VZI3 342 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 MOB1BQ7L9L4 216 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 CAMKMTQ7Z624 323 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 FGF7P21781 194 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 RPS19P39019 145 aaKnown RBP11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 NOVP48745 357 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 OTUD1Q5VV17 481 aaPredicted RBP11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 GALMQ96C23 342 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 MRGPRX4Q96LA9 322 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 ZDHHC5Q9C0B5 715 aa11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 MRPL22Q9NWU5 206 aaKnown RBP11.63□□□□□ -0.55
CCDC88C-204ENST00000389857 MARCH5Q9NX47 278 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms