RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 COG8Q96MW5 612 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 OXGR1Q96P68 337 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPRR4Q96PI1 79 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 RBP7Q96R05 134 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 PEBP4Q96S96 227 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 RMDN3Q96TC7 470 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 GAL3ST1Q99999 423 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 TUBGCP2Q9BSJ2 902 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 SHANK3Q9BYB0 1731 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM117Q9H0C3 514 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 Q9HAA7 133 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCL28Q9NRJ3 127 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 SEPT10Q9P0V9 454 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNRD1Q9P1U0 126 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 CGNQ9P2M7 1197 aaKnown RBP-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 RIMS3Q9UJD0 308 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCL26Q9Y258 94 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 MRPS33Q9Y291 106 aaKnown RBP-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 AP4B1Q9Y6B7 739 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 V9GYY5 206 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 LOXHD1Q8IVV2 1947 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAGI1Q96QZ7 1491 aaPredicted RBP-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATP8B3O60423 1300 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 KDM3AQ9Y4C1 1321 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 PHIPQ8WWQ0 1821 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 ATAD5Q96QE3 1844 aa-1.7□□□□□ -2.68
RNU6-540P-201ENST00000384622 MAST1Q9Y2H9 1570 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 RTEL1-TNFRSF6BF6WH68 1400 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV1-3A0A0C4DH29 117 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 A0A0D9SFI3 127 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF816-ZNF321PA0A0X1KG74 233 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 A0A1W2PPQ1 181 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR6C70A6NIJ9 312 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 C2orf70A6NJV1 201 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 GLOD5A6NK44 160 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF726A6NNF4 738 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 H7BZZ5 65 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 APOC4-APOC2K7ER74 178 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CHEK1O14757 476 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CYB5BO43169 146 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 MLNRO43193 412 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF208O43345 1280 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 KDELR3O43731 214 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR2T1O43869 369 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 RPS6KA5O75582 802 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGSF6O95976 241 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV2-5P01817 119 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 EPCAMP16422 314 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 IFNAR1P17181 557 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 VCLP18206 1134 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TUBG1P23258 451 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ICAM3P32942 547 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 NF2P35240 595 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 PSMC2P35998 433 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 DDOSTP39656 456 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 UBE2AP49459 152 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ERVS71-1P61550 626 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 FKBP1BP68106 108 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 DCDP81605 110 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CCNG2Q16589 344 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 UNC50Q53HI1 259 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CLEC12AQ5QGZ9 265 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 LPCAT4Q643R3 524 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TPGS2Q68CL5 300 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ITPRIPL1Q6GPH6 555 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPOPLQ6IQ16 392 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 LAIR2Q6ISS4 152 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TBPL2Q6SJ96 375 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 FAM131AQ6UXB0 335 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 FBXW12Q6X9E4 464 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TPGS1Q6ZTW0 290 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM173Q86WV6 379 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 PLA2G4DQ86XP0 818 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SNX29P2Q8IUI4 249 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CLVS1Q8IUQ0 354 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SLC43A2Q8N370 569 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF676Q8N7Q3 588 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 Q8N814 137 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF321PQ8N8H1 164 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CYB561A3Q8NBI2 242 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 LPCAT1Q8NF37 534 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 IPMKQ8NFU5 416 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR52E1Q8NGJ3 308 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR51A2Q8NGJ7 313 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR1N2Q8NGR9 330 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 RFESDQ8TAC1 157 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 C16orf78Q8WTQ4 265 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SELENOMQ8WWX9 145 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CORO2AQ92828 525 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 EMG1Q92979 244 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 SNX21Q969T3 373 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 ELMOD3Q96FG2 381 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 RBM41Q96IZ5 413 aaKnown RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 UBXN10Q96LJ8 280 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 JSRP1Q96MG2 331 aaPredicted RBP-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 TEAD3Q99594 435 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRR15LQ9BU68 103 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 CDCA4Q9BXL8 241 aa-1.71□□□□□ -2.68
RNU6-540P-201ENST00000384622 POLR2J2Q9GZM3 115 aaKnown RBP-1.71□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms