RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RNF113BQ8IZP6 322 aaKnown RBP13.36□□□□□ -0.27
VCX3A-201ENST00000381089 UBE2FQ969M7 185 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 APOBEC3DQ96AK3 386 aaPredicted RBP13.36□□□□□ -0.27
VCX3A-201ENST00000381089 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 PRDM13Q9H4Q3 707 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 TNFRSF19Q9NS68 423 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.36□□□□□ -0.27
VCX3A-201ENST00000381089 ASH2LQ9UBL3 628 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 A4GNTQ9UNA3 340 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 POLR1DQ9Y2S0 133 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
VCX3A-201ENST00000381089 CMYA5Q8N3K9 4069 aa13.36□□□□□ -0.27
VCX3A-201ENST00000381089 CLPSL1A2RUU4 121 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 PRSS37A4D1T9 235 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 KHDRBS3O75525 346 aaKnown RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 NDUFA7O95182 113 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 SELEP16581 610 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 NPY4RP50391 375 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 ERFP50548 548 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 MNAT1P51948 309 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 RPL15P61313 204 aaKnown RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 FGF12P61328 243 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 HLXQ14774 488 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 C8orf82Q6P1X6 216 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 ZNF730Q6ZMV8 503 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 DCDC5Q6ZRR9 648 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 RRM2BQ7LG56 351 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 ARPINQ7Z6K5 226 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 OFCC1Q8IZS5 231 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 OR13C2Q8NGS9 318 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 OR11L1Q8NGX0 322 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 SLC7A6Q92536 515 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 HOPXQ9BPY8 73 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 HCAR1Q9BXC0 346 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 RERGLQ9H628 205 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 MARCH7Q9H992 704 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 TMEM100Q9NV29 134 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 ADA2Q9NZK5 511 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 PDP1Q9P0J1 537 aaPredicted RBP13.35□□□□□ -0.27
VCX3A-201ENST00000381089 POMT1Q9Y6A1 747 aa13.35□□□□□ -0.27
VCX3A-201ENST00000381089 NME4O00746 187 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 IFNW1P05000 195 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 KDELR2P33947 212 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 SELENOWP63302 87 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 LIPEQ05469 1076 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 KCNJ8Q15842 424 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 MESTQ5EB52 335 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 CD276Q5ZPR3 534 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 Q6YL49 198 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 SLC15A3Q8IY34 581 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 DEFB107AQ8IZN7 70 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 PGAM4Q8N0Y7 254 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 RNF148Q8N7C7 305 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 ACOT11Q8WXI4 607 aaPredicted RBP13.34□□□□□ -0.27
VCX3A-201ENST00000381089 ERGIC1Q969X5 290 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 Q96M85 177 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 CITED1Q99966 193 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 SPAG4Q9NPE6 437 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 C1RLQ9NZP8 487 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 ADAM18Q9Y3Q7 739 aa13.34□□□□□ -0.27
VCX3A-201ENST00000381089 NOTCH1P46531 2555 aa13.33□□□□□ -0.27
VCX3A-201ENST00000381089 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 FAM220BPB1ANY3 271 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 F5H5P2 479 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 P2RY10O00398 339 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 SLC16A7O60669 478 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 LIPFP07098 398 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 CTLA4P16410 223 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 FPR3P25089 353 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 KRR1Q13601 381 aaKnown RBP13.33□□□□□ -0.28
VCX3A-201ENST00000381089 ZBED5Q49AG3 693 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 CCDC92Q53HC0 331 aaPredicted RBP13.33□□□□□ -0.28
VCX3A-201ENST00000381089 WDR25Q64LD2 544 aaPredicted RBP13.33□□□□□ -0.28
VCX3A-201ENST00000381089 ZNF620Q6ZNG0 422 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 BHLHE23Q8NDY6 225 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 GJC3Q8NFK1 279 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 OR2T12Q8NG77 320 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 TBC1D15Q8TC07 691 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 SSMEM1Q8WWF3 244 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 GATAD2BQ8WXI9 593 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 ZNF583Q96ND8 569 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 PCGF1Q9BSM1 259 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 NDE1Q9NXR1 346 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 RHCGQ9UBD6 479 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 TMEM5Q9Y2B1 443 aa13.33□□□□□ -0.28
VCX3A-201ENST00000381089 COA3Q9Y2R0 106 aaPredicted RBP13.33□□□□□ -0.28
VCX3A-201ENST00000381089 NOP16Q9Y3C1 178 aaKnown RBP13.33□□□□□ -0.28
VCX3A-201ENST00000381089 IGHV3-64DA0A0J9YX35 117 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 H0YL77 283 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 RER1O15258 196 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 MLNRO43193 412 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 DBHP09172 617 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 SDHAP31040 664 aa13.32□□□□□ -0.28
VCX3A-201ENST00000381089 GATA4P43694 442 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms