RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 SPNS1Q9H2V7 528 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 RIMS4Q9H426 269 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF629Q9UEG4 869 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 A0A1B0GUH1 482 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 OR5H14A6NHG9 310 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 ZIC2O95409 532 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 CISD2Q8N5K1 135 aaKnown RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 PTDSS2Q9BVG9 487 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 POMT2Q9UKY4 750 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 GABRA4P48169 554 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 EMDP50402 254 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 AQP6Q13520 282 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 Q6ZRG5 221 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 BATF2Q8N1L9 274 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 PBOV1Q9GZY1 135 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 AKIP1Q9NQ31 210 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 SDCBPO00560 298 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 CD3DP04234 171 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 ELLP55199 621 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 GFERP55789 205 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 AGERQ15109 404 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 ANKRD53Q8N9V6 530 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 SUCNR1Q9BXA5 334 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 PTPRZ1P23471 2315 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF724A8MTY0 619 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 SH2D1BO14796 132 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 CXCL13O43927 109 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 NDUFB7P17568 137 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF573Q86YE8 665 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 TMED6Q8WW62 240 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 KCNE4Q8WWG9 221 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 TTC9Q92623 222 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 UBE2ZQ9H832 354 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 WDR1O75083 606 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 SUB1P53999 127 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 NDUFA6P56556 154 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 RNF32Q9H0A6 362 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 FBXL4Q9UKA2 621 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 PMS2P1A4D2B8 440 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 MGST1P10620 155 aaKnown RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 SUMO3P55854 103 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 DMWDQ09019 674 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 TAF9Q16594 264 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 BAK1Q16611 211 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 HIST2H3AQ71DI3 136 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 LSRQ86X29 649 aaPredicted RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 RDH5Q92781 318 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 ISG20L2Q9H9L3 353 aaKnown RBP14.55□□□□□ -0.08
COL2A1-202ENST00000380518 PHIPQ8WWQ0 1821 aa14.55□□□□□ -0.08
COL2A1-202ENST00000380518 A0A0B4J203 849 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 TRAV1-2A0A0B4J238 106 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OR2J2O76002 312 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 DEFA4P12838 97 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OPRM1P35372 400 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 TAGLNQ01995 201 aaKnown RBP14.54□□□□□ -0.08
COL2A1-202ENST00000380518 ADAM5Q6NVV9 412 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 RHNO1Q9BSD3 238 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 SRRQ9GZT4 340 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 HDGFL3Q9Y3E1 203 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 A0A087WZY1 265 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 K7EQM0 130 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 FABP1P07148 127 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 EPXP11678 715 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 TMEM182Q6ZP80 229 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-202ENST00000380518 CDH26Q8IXH8 852 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OR2AK2Q8NG84 335 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 C14orf79Q96F83 325 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 PARP12Q9H0J9 701 aaKnown RBP14.54□□□□□ -0.08
COL2A1-202ENST00000380518 SLC25A32Q9H2D1 315 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 PLEKHA2Q9HB19 425 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 B9D1Q9UPM9 204 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 GAB2Q9UQC2 676 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 PRKNO60260 465 aaPredicted RBP14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OR4E1P0C645 316 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 ZGLP1P0C6A0 271 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 FCGR2CP31995 323 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 GZMKP49863 264 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 APH1BQ8WW43 257 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 PLA2G12AQ9BZM1 189 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 AKAP11Q9UKA4 1901 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 DHHO43323 396 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OR5H8P0DN80 308 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 SSBP1Q04837 148 aaKnown RBP14.54□□□□□ -0.08
COL2A1-202ENST00000380518 HES1Q14469 280 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 FAAP20Q6NZ36 180 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 OR10Z1Q8NGY1 313 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 UFSP2Q9NUQ7 469 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 SLCO1C1Q9NYB5 712 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 AK3Q9UIJ7 227 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 A0A1B0GUL6 1792 aa14.54□□□□□ -0.08
COL2A1-202ENST00000380518 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 RRP8O43159 456 aaKnown RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 DBPQ10586 325 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-202ENST00000380518 FZD2Q14332 565 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SMIM4Q8WVI0 70 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF385DQ9H6B1 395 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 C5orf49A4QMS7 147 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 RAC1P63000 192 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 PDZK1IP1Q13113 114 aa14.53□□□□□ -0.08
COL2A1-202ENST00000380518 SMAD4Q13485 552 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms