RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KIR3DL3Q8N743 410 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 C19orf18Q8NEA5 215 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 TECTBQ96PL2 329 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 SLC30A2Q9BRI3 323 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 PCGF1Q9BSM1 259 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 MARCH7Q9H992 704 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 CMTM6Q9NX76 183 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 ATPIF1Q9UII2 106 aa19.29■□□□□ 0.68
U2AF1-202ENST00000380276 KIR2DS1A0A191URI9 304 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 FAM181BA6NEQ2 426 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 IQCF6A8MYZ5 107 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 SRSF4Q08170 494 aaKnown RBP19.28■□□□□ 0.68
U2AF1-202ENST00000380276 FGD3Q5JSP0 725 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 RUSC1-AS1Q66K80 236 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 FIP1L1Q6UN15 594 aaKnown RBP19.28■□□□□ 0.68
U2AF1-202ENST00000380276 LYPD2Q6UXB3 125 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 FAM156AQ8NDB6 213 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 GJC3Q8NFK1 279 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 OR11L1Q8NGX0 322 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 COQ7Q99807 217 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 CDADC1Q9BWV3 514 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 HDHD2Q9H0R4 259 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 MMADHCQ9H3L0 296 aaPredicted RBP19.28■□□□□ 0.68
U2AF1-202ENST00000380276 BEX1Q9HBH7 125 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 CAPN7Q9Y6W3 813 aa19.28■□□□□ 0.68
U2AF1-202ENST00000380276 SERPINA1P01009 418 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 RAG2P55895 527 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 LIPEQ05469 1076 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 ZNF181Q2M3W8 571 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 DNM1P34Q6PK57 102 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 PTCHD4Q6ZW05 846 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 CBLL1Q75N03 491 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 ARPINQ7Z6K5 226 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 ADCK1Q86TW2 530 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 FITM2Q8N6M3 262 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 OR4F5Q8NH21 305 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 FAM162AQ96A26 154 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 RSRC1Q96IZ7 334 aaKnown RBP19.27■□□□□ 0.68
U2AF1-202ENST00000380276 TSSK2Q96PF2 358 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 UFSP2Q9NUQ7 469 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 VSX1Q9NZR4 365 aaPredicted RBP19.27■□□□□ 0.68
U2AF1-202ENST00000380276 KIF17Q9P2E2 1029 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 AURKCQ9UQB9 309 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 AP3M1Q9Y2T2 418 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 TRRAPQ9Y4A5 3859 aa19.27■□□□□ 0.68
U2AF1-202ENST00000380276 PKD1L1Q8TDX9 2849 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 SRRM5B3KS81 715 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 PMELP40967 661 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 RPS6KA3P51812 740 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 PRAMEF6Q5VXH4 476 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 WDR25Q64LD2 544 aaPredicted RBP19.26■□□□□ 0.67
U2AF1-202ENST00000380276 BRICD5Q6PL45 260 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 DCDC5Q6ZRR9 648 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 HDXQ7Z353 690 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 BOLLQ8N9W6 283 aaKnown RBP19.26■□□□□ 0.67
U2AF1-202ENST00000380276 CCT8L2Q96SF2 557 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 NRIP3Q9NQ35 241 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 FGFR1OP2Q9NVK5 253 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 SIGLEC7Q9Y286 467 aa19.26■□□□□ 0.67
U2AF1-202ENST00000380276 FAM32AQ9Y421 112 aaKnown RBP19.26■□□□□ 0.67
U2AF1-202ENST00000380276 PHYHO14832 338 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 ENSAO43768 121 aaKnown RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 H1F0P07305 194 aaKnown RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 CRABP1P29762 137 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 CDKN2AP42771 156 aaKnown RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 ZNF362Q5T0B9 420 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 PGM2L1Q6PCE3 622 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 LINC00346Q8IVM7 164 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 SLC7A13Q8TCU3 470 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 DACT3Q96B18 629 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 ANKRD19PQ9H560 264 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 SRA1Q9HD15 236 aaKnown RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 KRCC1Q9NPI7 259 aaPredicted RBP19.25■□□□□ 0.67
U2AF1-202ENST00000380276 ARMCX1Q9P291 453 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 TMCC3Q9ULS5 477 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 MMP24Q9Y5R2 645 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 LHFPL6Q9Y693 200 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 ENPP4Q9Y6X5 453 aa19.25■□□□□ 0.67
U2AF1-202ENST00000380276 A0A1B0GUS0 222 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 F5H5K5 113 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 FAM20BO75063 409 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 PTP4A3O75365 173 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 PPP1R3DO95685 299 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 RAD23AP54725 363 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 MALLQ13021 153 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 KCNMB1Q16558 191 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 SLC15A3Q8IY34 581 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 WFDC12Q8WWY7 111 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 PITX2Q99697 317 aa19.24■□□□□ 0.67
U2AF1-202ENST00000380276 UNC119BA6NIH7 251 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 C22orf46C9J442 243 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 LCATP04180 440 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 SLC7A2P52569 658 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 OLFML2AQ68BL7 652 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 DPY19L2P2Q6ZN68 376 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 SPRYD4Q8WW59 207 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-202ENST00000380276 SLCO4A1Q96BD0 722 aa19.23■□□□□ 0.67
U2AF1-202ENST00000380276 ERMAPQ96PL5 475 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-202ENST00000380276 GPX7Q96SL4 187 aaPredicted RBP19.23■□□□□ 0.67
U2AF1-202ENST00000380276 CHIAQ9BZP6 476 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms