RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ALKBH3Q96Q83 286 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 MMP28Q9H239 520 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF319Q9P2F9 582 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 CSAG2Q9Y5P2 127 aa17.48■□□□□ 0.39
PDLIM5-205ENST00000380180 A0A1B0GTI1 187 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 ANOS1P23352 680 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 CTSSP25774 331 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 CARTPTQ16568 116 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 CCDC92Q53HC0 331 aaPredicted RBP17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 LINGO2Q7L985 606 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 PRSS45Q7RTY3 260 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 ZNF283Q8N7M2 679 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 OR51D1Q8NGF3 324 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 OR8B12Q8NGG6 310 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 CPT1CQ8TCG5 803 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 RAB40AQ8WXH6 277 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 NKX3-1Q99801 234 aaPredicted RBP17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 ACKR4Q9NPB9 350 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 SLC17A2O00624 439 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 TNFSF10P50591 281 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 SCAND1P57086 179 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 PLA2G7Q13093 441 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 CAMK2BQ13554 666 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 GLT8D1Q68CQ7 371 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 MZT2BQ6NZ67 158 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 FAM109AQ8N4B1 249 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 TMEM178AQ8NBL3 297 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 DEFB127Q9H1M4 99 aa17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 RBFOX1Q9NWB1 397 aaKnown RBP17.47■□□□□ 0.39
PDLIM5-205ENST00000380180 ASPMQ8IZT6 3477 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 IGKV3D-15A0A087WSY6 115 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 DGCR2P98153 550 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 SPOCK1Q08629 439 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 RNASE12Q5GAN4 147 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 RNFT1Q5M7Z0 435 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 FAM166AQ6J272 317 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 NAA40Q86UY6 237 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 OR1J2Q8NGS2 313 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 ENKURQ8TC29 256 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 YIPF5Q969M3 257 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 HAVCR1Q96D42 359 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 TMEM38BQ9NVV0 291 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 LIPGQ9Y5X9 500 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 LOC400499M0QZD8 3231 aa17.46■□□□□ 0.39
PDLIM5-205ENST00000380180 A0A1B0GVI7 797 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 DCDC2BA2VCK2 349 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 MEGF11A6BM72 1044 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 BOLA2-SMG1P6H3BVE0 249 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 TFECO14948 347 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 SYNGR4O95473 234 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CD3GP09693 182 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CD37P11049 281 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CD300CQ08708 224 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RAB11BQ15907 218 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 BCL2A1Q16548 175 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RSPO1Q2MKA7 263 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 C2orf76Q3KRA6 126 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ELFN2Q5R3F8 820 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RIPPLY2Q5TAB7 128 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 MYO7BQ6PIF6 2116 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 FAM57BQ71RH2 274 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 TMEM45BQ96B21 275 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ADAT3Q96EY9 351 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RABL2AQ9UBK7 228 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CDV3Q9UKY7 258 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RABL2BQ9UNT1 228 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 NOSIPQ9Y314 301 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ZFHX4Q86UP3 3567 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ARHGAP21Q5T5U3 1957 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 F5H5K5 113 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CTDSPLO15194 276 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 PTPRZ1P23471 2315 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CLN3Q13286 438 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 RTP5Q14D33 572 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CEACAM16Q2WEN9 425 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 SLC36A2Q495M3 483 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ASCL5Q7RTU5 278 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ABHD12BQ7Z5M8 362 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 FNDC9Q8TBE3 224 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 FAM3DQ96BQ1 224 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ZC3HAV1LQ96H79 300 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 SOX7Q9BT81 388 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 GPR35Q9HC97 309 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 PLEK2Q9NYT0 353 aa17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 CGGBP1Q9UFW8 167 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 MCTS1Q9ULC4 181 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 TNRC6AQ8NDV7 1962 aaKnown RBP17.45■□□□□ 0.38
PDLIM5-205ENST00000380180 ACOT7O00154 380 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 MRPL33O75394 65 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 ACTL6AO96019 429 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 TMIGD3P0DMS9 266 aaPredicted RBP17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 CDK2P24941 298 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 GNALP38405 381 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 POU3F4P49335 361 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 SRP9P49458 86 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 C3AR1Q16581 482 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 GLYATL3Q5SZD4 288 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 MTFR2Q6P444 385 aa17.44■□□□□ 0.38
PDLIM5-205ENST00000380180 GLCCI1Q86VQ1 547 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms