RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 PLSCR5A0PG75 271 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 TRAPPC2LH3BP13 241 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 SEMG1P04279 462 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 EIF5AP63241 154 aaKnown RBP12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 ETFDHQ16134 617 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 SPINK14Q6IE38 97 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 VHLLQ6RSH7 139 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 DOK3Q7L591 496 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 NARFLQ9H6Q4 476 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 TIMM10BQ9Y5J6 103 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 AIPO00170 330 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 AGPAT2O15120 278 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 CCL3P10147 92 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 MC2RQ01718 297 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 OR10K2Q6IF99 312 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 STAC2Q6ZMT1 411 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 PRRT1Q99946 306 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 WDR54Q9H977 334 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 MAGEB1P43366 347 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 GZMKP49863 264 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 AKR1C2P52895 323 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 RAC1P63000 192 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 AKR1C1Q04828 323 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC25A35Q3KQZ1 300 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 FAM198BQ6UWH4 519 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 ADGRE4PQ86SQ3 457 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 TRAPPC6BQ86SZ2 158 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 OR56B4Q8NH76 319 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 GCDHQ92947 438 aaPredicted RBP12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 DDOQ99489 341 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 BANF2Q9H503 90 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 EXOGQ9Y2C4 368 aaKnown RBP12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 PTPRDP23468 1912 aa12.73□□□□□ -0.37
SHROOM1-203ENST00000378679 TOR1AO14656 332 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PRAF2O60831 178 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PVALBP20472 110 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 M6PRP20645 277 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CD79BP40259 229 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 MEF2DQ14814 521 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 C3P1Q6ZMU1 363 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 C17orf107Q6ZR85 190 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 TEX19Q8NA77 164 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 NPEPL1Q8NDH3 523 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 NOXO1Q8NFA2 376 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 SARAFQ96BY9 339 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CMSS1Q9BQ75 279 aaKnown RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 JAM3Q9BX67 310 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 ZNF223Q9UK11 482 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 UBE2J1Q9Y385 318 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 SP9P0CG40 484 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 EFNA3P52797 238 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 GRK1Q15835 563 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PDZD9Q8IXQ8 264 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 GALNT16Q8N428 558 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CPNE4Q96A23 557 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PBOV1Q9GZY1 135 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 NTMQ9P121 344 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 LRP12Q9Y561 859 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PLPP2O43688 288 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 MPZL1O95297 269 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 EPXP11678 715 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 MGAT2Q10469 447 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 FOXC1Q12948 553 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 TNK1Q13470 666 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 DOC2BQ14184 412 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 OR9K2Q8NGE7 335 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 M1APQ8TC57 530 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CRLF2Q9HC73 371 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 QPCTLQ9NXS2 382 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 KCNIP1Q9NZI2 227 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 DUSP13Q9UII6 198 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 FBXL2Q9UKC9 423 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 C5orf42Q9H799 3197 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 LGALS8O00214 317 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 TIAF1O95411 115 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CELA2AP08217 269 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 PMPCAQ10713 525 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 CEBPEQ15744 281 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 GPR155Q7Z3F1 870 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 OR1M1Q8NGA1 313 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 DVL3Q92997 716 aaPredicted RBP12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 SYT3Q9BQG1 590 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 DNTTIP1Q9H147 329 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 DNAJB11Q9UBS4 358 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
SHROOM1-203ENST00000378679 HTTP42858 3142 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 PLXNA3P51805 1871 aa12.71□□□□□ -0.37
SHROOM1-203ENST00000378679 B4E171 279 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms