RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 HPNP05981 417 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 CEACAM5P06731 702 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 CTSLP07711 333 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 APEHP13798 732 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 TAGLN2P37802 199 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 NKX2-1P43699 371 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 SLC25A1P53007 311 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PNLIPRP2P54317 469 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 CDKN3Q16667 212 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 LINC00303Q3SY05 128 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ZNF628Q5EBL2 1059 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 SFRP5Q5T4F7 317 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 BRICD5Q6PL45 260 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 KIRREL2Q6UWL6 708 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 DND1Q8IYX4 353 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 FBXL6Q8N531 539 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 NANPQ8TBE9 248 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 BORCS7Q96B45 105 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ELSPBP1Q96BH3 223 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ALG14Q96F25 216 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 LIN37Q96GY3 246 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 UHRF2Q96PU4 802 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 KCNIP2Q9NS61 270 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PADI1Q9ULC6 663 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 EXO1Q9UQ84 846 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 A0A0B4J203 849 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 MAGEB4O15481 346 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 DOK2O60496 412 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ALOX12BO75342 701 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ABHD16AO95870 558 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 OLFM2O95897 454 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 FOLR1P15328 257 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ATF1P18846 271 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ENPP1P22413 925 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 CD27P26842 260 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ARL3P36405 182 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PXNP49023 591 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 PCBP4P57723 403 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 RAB1AP62820 205 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 TMEM41BQ5BJD5 291 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 UQCC3Q6UW78 93 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 DPPA2Q7Z7J5 298 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 MAML2Q8IZL2 1156 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 SLC38A9Q8NBW4 561 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 SEMA6DQ8NFY4 1073 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 OR52H1Q8NGJ2 320 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 EDAQ92838 391 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ZNF707Q96C28 371 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 WDR89Q96FK6 387 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 SDSLQ96GA7 329 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 KLF15Q9UIH9 416 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 LAMA1P25391 3075 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 SEC16AO15027 2179 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 A0A087WUJ7 227 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 A0A0U1RQK1 487 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 RFPL4AA6NLU0 287 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 RFPL4AL1F8VTS6 287 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 STMND1H3BQB6 276 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 LGALS8O00214 317 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 HLA-HP01893 362 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 H2AFB1P0C5Y9 115 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 AADACP22760 399 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 CD80P33681 288 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 UBE2IP63279 158 aaKnown RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 KIAA0141Q14154 515 aaPredicted RBP7.61□□□□□ -1.19
VPS36-201ENST00000378060 PCK2Q16822 640 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PRAMEF20Q5VT98 475 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 C17orf107Q6ZR85 190 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 ARRDC1Q8N5I2 433 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PIGTQ969N2 578 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 C2orf50Q96LR7 162 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 BANF2Q9H503 90 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PLEKHF2Q9H8W4 249 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 OR14J1Q9UGF5 321 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 NDRG3Q9UGV2 375 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 FOXJ3Q9UPW0 622 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 PIGLQ9Y2B2 252 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 DENND4CQ5VZ89 1909 aa7.61□□□□□ -1.19
VPS36-201ENST00000378060 A6NCN8 305 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZNF814B7Z6K7 855 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 E5RGE8 158 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PRSS44E7EML9 344 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 TRIM77I1YAP6 450 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 BCL2L11O43521 198 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SIGLEC6O43699 453 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 NKX2-2O95096 273 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 AKR7A3O95154 331 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ST6GAL1P15907 406 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 RBP2P50120 134 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 EPHA4P54764 986 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 F2RL1P55085 397 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 PLXDC2Q6UX71 529 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZNF813Q6ZN06 617 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 GLCCI1Q86VQ1 547 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 SPICQ8N5J4 248 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 ZBTB44Q8NCP5 570 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 MORN4Q8NDC4 146 aa7.6□□□□□ -1.19
VPS36-201ENST00000378060 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms