RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 SLCO1C1Q9NYB5 712 aa16.96■□□□□ 0.3
CNTNAP3B-203ENST00000377561 HRH3Q9Y5N1 445 aa16.96■□□□□ 0.3
CNTNAP3B-203ENST00000377561 FOSL1P15407 271 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GALP22466 123 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GPR3P46089 330 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 RNF4P78317 190 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ZIC1Q15915 447 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 BSCL2Q96G97 398 aaPredicted RBP16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 BCO1Q9HAY6 547 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SPINT2O43291 252 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SUMO3P55854 103 aaPredicted RBP16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 A0A1W2PPH5 198 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TBXA2RP21731 343 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 RAD52P43351 418 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NANPQ8TBE9 248 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NEURL2Q9BR09 285 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 C12orf49Q9H741 205 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SLC39A9Q9NUM3 307 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TMEM235A6NFC5 223 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SPNP16150 400 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TGM1P22735 817 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SSX1Q16384 188 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 C6orf15Q6UXA7 325 aaPredicted RBP16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 OR51A2Q8NGJ7 313 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 FAM213BQ8TBF2 198 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 APH1AQ96BI3 265 aa16.95■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NRG2O14511 850 aaPredicted RBP16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 M6PRP20645 277 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SMIM4Q8WVI0 70 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TTC9Q92623 222 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ZG16BQ96DA0 208 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 RNF170Q96K19 258 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 WDFY2Q96P53 400 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 RPP25Q9BUL9 199 aaKnown RBP16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 BARHL1Q9BZE3 327 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PHF1O43189 567 aaPredicted RBP16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 POU2F2P09086 479 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PPT1P50897 306 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 Q6ZS52 159 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 A0A1B0GUH1 482 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 KIR2DL3P43628 341 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 MMP15P51511 669 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PRICKLE4Q2TBC4 344 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 CYSLTR2Q9NS75 346 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 C20orf141Q9NUB4 165 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 VN1R4Q7Z5H5 301 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 YRDCQ86U90 279 aaKnown RBP16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 AUNIPQ9H7T9 357 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ERVMER34-1Q9H9K5 563 aa16.94■□□□□ 0.3
CNTNAP3B-203ENST00000377561 OR6C65A6NJZ3 312 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NME1P15531 152 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 LGI3Q8N145 548 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NUDT9Q9BW91 350 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GPR84Q9NQS5 396 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 EXOSC3Q9NQT5 275 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 MBD1Q9UIS9 605 aaPredicted RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ING1Q9UK53 422 aaPredicted RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 EXOGQ9Y2C4 368 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PUS1Q9Y606 427 aaKnown RBP eCLIP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 OR2J2O76002 312 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 LIMS3P0CW19 117 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 LIMS4P0CW20 117 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NPBWR1P48145 328 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 RBP2P50120 134 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 INTS12Q96CB8 462 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 KIRREL1Q96J84 757 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 DERL3Q96Q80 235 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 OIP5O43482 229 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ZIC2O95409 532 aaPredicted RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 APEHP13798 732 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GPBAR1Q8TDU6 330 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 THOC3Q96J01 351 aaKnown RBP16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TCEAL7Q9BRU2 100 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PCED1AQ9H1Q7 454 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GPR173Q9NS66 373 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SNRPGP15A8MWD9 76 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NME2P22392 152 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GZMKP49863 264 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 MFSD4AQ8N468 514 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 OR1N1Q8NGS0 311 aa16.93■□□□□ 0.3
CNTNAP3B-203ENST00000377561 CCSO14618 274 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 HOXB3P14651 431 aaPredicted RBP16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ARL16Q0P5N6 197 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 TERB2Q8NHR7 220 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 PBOV1Q9GZY1 135 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 DNAJB12Q9NXW2 375 aaKnown RBP16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SLC5A6Q9Y289 635 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 GSK3AP49840 483 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SLC25A1P53007 311 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 HES1Q14469 280 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 NAA40Q86UY6 237 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 SCCPDHQ8NBX0 429 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 C3orf49Q96BT1 292 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 ORAI1Q96D31 301 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 KTI12Q96EK9 354 aaPredicted RBP16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 MMP25Q9NPA2 562 aa16.92■□□□□ 0.3
CNTNAP3B-203ENST00000377561 FLVCR2Q9UPI3 526 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms