RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-204ENST00000376643 PRDX6P30041 224 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 GATA4P43694 442 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 PSME3P61289 254 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 HIST1H3AP68431 136 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 PAX8Q06710 450 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 HIST2H3PS2Q5TEC6 136 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 GLYATQ6IB77 296 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 OR2T2Q6IF00 324 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 RPL13AP3Q6NVV1 102 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 C9orf139Q6ZV77 190 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 HIST2H3AQ71DI3 136 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 OR4C15Q8NGM1 316 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 DHRS1Q96LJ7 313 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 ERMAPQ96PL5 475 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-204ENST00000376643 ATF6BQ99941 703 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 POFUT1Q9H488 388 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 ESM1Q9NQ30 184 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 DCAF16Q9NXF7 216 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 MAGEL2Q9UJ55 1249 aa12.39□□□□□ -0.43
HDAC6-204ENST00000376643 DYSFO75923 2080 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 PHYHO14832 338 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 GADD45GO95257 159 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
HDAC6-204ENST00000376643 EGR1P18146 543 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 FPR3P25089 353 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 NPY4RP50391 375 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 TPTEP56180 551 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 MZT1Q08AG7 82 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 HLXQ14774 488 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-204ENST00000376643 TUSC1Q2TAM9 212 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 RFX4Q33E94 735 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 SPRNQ5BIV9 151 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 LEG1Q6P5S2 330 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 KLBQ86Z14 1044 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 OR10AD1Q8NGE0 317 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 RAB40AQ8WXH6 277 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 SLC7A6Q92536 515 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 SPTSSAQ969W0 71 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 UPRTQ96BW1 309 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 PITX2Q99697 317 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 C1QTNF5Q9BXJ0 243 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF696Q9H7X3 374 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 GORASP2Q9H8Y8 452 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 ADA2Q9NZK5 511 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF69Q9UC07 566 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 TMCC3Q9ULS5 477 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 LHFPL6Q9Y693 200 aa12.38□□□□□ -0.43
HDAC6-204ENST00000376643 IGLV1-36A0A0B4J1U3 117 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 IGHV2-70DA0A0C4DH43 119 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 TRBV4-1A0A0J9YWV2 114 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 A0A1B0GWJ7 208 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 HLA-DQA2P01906 255 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 DBHP09172 617 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 NCK1P16333 377 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 FUT4P22083 530 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
HDAC6-204ENST00000376643 CDKN2AP42771 156 aaKnown RBP12.37□□□□□ -0.43
HDAC6-204ENST00000376643 PITPNBP48739 271 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 SPIBQ01892 262 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF404Q494X3 552 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 PRR31Q5SQ13 230 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 CD276Q5ZPR3 534 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 DCDC5Q6ZRR9 648 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 PTCHD4Q6ZW05 846 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 MRPL21Q7Z2W9 205 aaKnown RBP12.37□□□□□ -0.43
HDAC6-204ENST00000376643 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 PLPP7Q8NBV4 271 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 SLC26A10Q8NG04 563 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 OR52L1Q8NGH7 329 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 Q8TCH9 128 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 SPRYD4Q8WW59 207 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-204ENST00000376643 IFT27Q9BW83 186 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 NSRP1Q9H0G5 558 aaKnown RBP12.37□□□□□ -0.43
HDAC6-204ENST00000376643 OR52D1Q9H346 318 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 OPA3Q9H6K4 179 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 TMEM165Q9HC07 324 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 CLN8Q9UBY8 286 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
HDAC6-204ENST00000376643 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 OR10H3O60404 316 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 LIPFP07098 398 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 ZNF823P16415 610 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 CD200P41217 278 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 SEC61A1P61619 476 aaKnown RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 GPR157Q5UAW9 335 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-204ENST00000376643 ZBTB46Q86UZ6 589 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 MOGAT3Q86VF5 341 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 SPERTQ8NA61 448 aa12.36□□□□□ -0.43
HDAC6-204ENST00000376643 BHLHE23Q8NDY6 225 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms