RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SLC25A42Q86VD7 318 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 KCNRGQ8N5I3 272 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 GVQW1Q8N7I0 195 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 PLPP5Q8NEB5 264 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 OR52N4Q8NGI2 321 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 ST8SIA1Q92185 356 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 C5orf34Q96MH7 638 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 LMAN1LQ9HAT1 526 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 C12orf4Q9NQ89 552 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 CTSFQ9UBX1 484 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 VDAC3Q9Y277 283 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 KIF26BQ2KJY2 2108 aa12.98□□□□□ -0.33
MSH5-201ENST00000375703 KANTRA0A1W2PQU2 76 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 HSD11B1P28845 292 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 STARP49675 285 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 KLHL24Q6TFL4 600 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR10H5Q8NGA6 315 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 CHST11Q9NPF2 352 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 SLC2A8Q9NY64 477 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 PLEKHA6Q9Y2H5 1048 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 EYSQ5T1H1 3165 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 RP1P56715 2156 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 A0A1B0GW55 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 SYT7O43581 403 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L2P0CJ85 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L3P0CJ86 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L4P0CJ87 422 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L5P0CJ88 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L6P0CJ89 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4L7P0CJ90 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 SLC25A4P12235 298 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 ZBTB25P24278 435 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 ARSKQ6UWY0 536 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 LYG2Q86SG7 212 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR10K1Q8NGX5 313 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 C11orf40Q8WZ69 217 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 SLAMF6Q96DU3 332 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUSP15Q9H1R2 295 aaPredicted RBP12.97□□□□□ -0.33
MSH5-201ENST00000375703 PTGES2Q9H7Z7 377 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 FAM206AQ9NX38 181 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DUX4Q9UBX2 424 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 TNFSF18Q9UNG2 199 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR2F2O95006 317 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 TTRP02766 147 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 IL13RA1P78552 427 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 UNC119Q13432 240 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR2F1Q13607 317 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 JMJD6Q6NYC1 403 aaPredicted RBP12.97□□□□□ -0.33
MSH5-201ENST00000375703 CPAMD8Q8IZJ3 1885 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 CARFQ8N187 725 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 SLC22A24Q8N4F4 322 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 OR1M1Q8NGA1 313 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 PPP1R1CQ8WVI7 109 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 DDIT4LQ96D03 193 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 ADAT3Q96EY9 351 aaPredicted RBP12.97□□□□□ -0.33
MSH5-201ENST00000375703 VRK1Q99986 396 aaPredicted RBP12.97□□□□□ -0.33
MSH5-201ENST00000375703 PBOV1Q9GZY1 135 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 CST11Q9H112 138 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 WDR13Q9H1Z4 485 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
MSH5-201ENST00000375703 ARID1BQ8NFD5 2236 aaPredicted RBP12.96□□□□□ -0.33
MSH5-201ENST00000375703 FAM25EA8MYX2 175 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 DUX1O43812 170 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
MSH5-201ENST00000375703 BIDP55957 195 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 PPP1R1AQ13522 171 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 SLC22A6Q4U2R8 563 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 BEX5Q5H9J7 111 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 TFAP2EQ6VUC0 442 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 OR5D14Q8NGL3 314 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 NUDCD2Q8WVJ2 157 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 MRPS24Q96EL2 167 aaKnown RBP12.96□□□□□ -0.33
MSH5-201ENST00000375703 FGF21Q9NSA1 209 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 VCANP13611 3396 aa12.96□□□□□ -0.33
MSH5-201ENST00000375703 H3BML4 177 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 TRIM77I1YAP6 450 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 STK17BO94768 372 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 VSIG8P0DPA2 414 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 CD96P40200 585 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 ZNF345Q14585 488 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 ZDHHC22Q8N966 263 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 PHB2Q99623 299 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 IFT46Q9NQC8 304 aa12.96□□□□□ -0.34
MSH5-201ENST00000375703 C9orf170A2RU37 121 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 NPIPB13A6NJU9 1138 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 VSTM2BA6NLU5 285 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 NPIPB4C9JG80 1138 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 BPNT1O95861 308 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 MYF5P13349 255 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 GNB3P16520 340 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 HLA-GP17693 338 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 AVPR2P30518 371 aa12.95□□□□□ -0.34
MSH5-201ENST00000375703 CSNK1EP49674 416 aaKnown RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 LUMP51884 338 aaPredicted RBP12.95□□□□□ -0.34
MSH5-201ENST00000375703 ATP1B3P54709 279 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms