RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 SPATC1Q76KD6 591 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 MUC15Q8N387 334 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 RFLNBQ8N5W9 214 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 MRPL24Q96A35 216 aaKnown RBP12.92□□□□□ -0.34
HSPG2-201ENST00000374673 APOBEC3DQ96AK3 386 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-201ENST00000374673 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 COG8Q96MW5 612 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 OR8B4Q96RC9 309 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 TRAF4Q9BUZ4 470 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-201ENST00000374673 NIPAL2Q9H841 368 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 AMBNQ9NP70 447 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 CBLN4Q9NTU7 201 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 ST6GALNAC2Q9UJ37 374 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 RAB26Q9ULW5 256 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 EDARQ9UNE0 448 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 CMAHPQ9Y471 501 aa12.92□□□□□ -0.34
HSPG2-201ENST00000374673 HRNRQ86YZ3 2850 aaPredicted RBP12.92□□□□□ -0.34
HSPG2-201ENST00000374673 FBN2P35556 2912 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 A0A1W2PQL4 384 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-201ENST00000374673 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 H3BSA7 217 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF254O75437 659 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 RAF1P04049 648 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 SOD3P08294 240 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 OR4A8P0C604 315 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF250P15622 560 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 DCTDP32321 178 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 SERPINF1P36955 418 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 PRKXP51817 358 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 PPP1CBP62140 327 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ACTC1P68032 377 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ACTA1P68133 377 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 KLHL22Q53GT1 634 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 C11orf71Q6IPW1 123 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 LAIR2Q6ISS4 152 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-201ENST00000374673 KRT77Q7Z794 578 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF679Q8IYX0 411 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF283Q8N7M2 679 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 OR10H4Q8NGA5 316 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 SLC25A40Q8TBP6 338 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 NINJ1Q92982 152 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
HSPG2-201ENST00000374673 TBX5Q99593 518 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-201ENST00000374673 DOK1Q99704 481 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 MROQ9BYG7 248 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 SLCO1C1Q9NYB5 712 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 LAMP3Q9UQV4 416 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 LRP12Q9Y561 859 aa12.91□□□□□ -0.34
HSPG2-201ENST00000374673 ROS1P08922 2347 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 DCHS2Q6V1P9 2916 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 IGLV3-9A0A075B6K5 115 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 B9A039 149 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 ATE1O95260 518 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 FADS2O95864 444 aaKnown RBP12.9□□□□□ -0.34
HSPG2-201ENST00000374673 CD8AP01732 235 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 CD53P19397 219 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 SLC6A9P48067 706 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 CX3CR1P49238 355 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 EVX1P49640 407 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF85Q03923 595 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 SWI5Q1ZZU3 235 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 MST1LQ2TV78 715 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 MBNL2Q5VZF2 373 aaKnown RBP12.9□□□□□ -0.34
HSPG2-201ENST00000374673 SSX6Q7RTT6 188 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 PIGTQ969N2 578 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 CCL19Q99731 98 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 TTTY10Q9BZA0 68 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
HSPG2-201ENST00000374673 OR2J1Q9GZK6 312 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 PLK3Q9H4B4 646 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 PLCXD1Q9NUJ7 323 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 STARD10Q9Y365 291 aa12.9□□□□□ -0.34
HSPG2-201ENST00000374673 CELSR2Q9HCU4 2923 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 TMEM129A0AVI4 362 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 IRGMA1A4Y4 181 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 PSMD9O00233 223 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 IGHA1P01876 353 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 LCATP04180 440 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 RIDAP52758 137 aaKnown RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 ZNF684Q5T5D7 378 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 PRSS45Q7RTY3 260 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 ACBD7Q8N6N7 88 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 OR52I1Q8NGK6 324 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 SYNPRQ8TBG9 265 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 KLF14Q8TD94 323 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 JAM3Q9BX67 310 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 POFUT1Q9H488 388 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 SP140LQ9H930 580 aa12.89□□□□□ -0.35
HSPG2-201ENST00000374673 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-201ENST00000374673 INPP5EQ9NRR6 644 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms