RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CEACAM4O75871 244 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 CD2P06729 351 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 TAS2R20P59543 309 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 WIPI1Q5MNZ9 446 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ABHD17BQ5VST6 288 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 SERPINA12Q8IW75 414 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 GJC3Q8NFK1 279 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 TSEN15Q8WW01 171 aaKnown RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 FBXO17Q96EF6 278 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ADAT3Q96EY9 351 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 S100A16Q96FQ6 103 aaKnown RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 RNF170Q96K19 258 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 PRRX2Q99811 253 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 IGHV3-15A0A0B4J1V0 119 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 GGT3PA6NGU5 568 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 CASRP41180 1078 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 EFNB2P52799 333 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 RAB11BQ15907 218 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 SIAH3Q8IW03 269 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 OR5AS1Q8N127 324 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ZBTB8BQ8NAP8 495 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 OR13C3Q8NGS6 347 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 OR14K1Q8NGZ2 314 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 SLC7A6Q92536 515 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 FAM3DQ96BQ1 224 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ABI3Q9P2A4 366 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 NCOR1O75376 2440 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 OR5H15A6NDH6 313 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ECDO95905 644 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 MAS1P04201 325 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 MELTFP08582 738 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 LIPCP11150 499 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 CAMK2BQ13554 666 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 C2orf76Q3KRA6 126 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 OR51A2Q8NGJ7 313 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 AUNIPQ9H7T9 357 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 ANAPC10Q9UM13 185 aa11.05□□□□□ -0.64
PRPF4-202ENST00000374199 NCOA6Q14686 2063 aaPredicted RBP11.05□□□□□ -0.64
PRPF4-202ENST00000374199 NAP1L6A6NFF2 107 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 SULT1C2O00338 296 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 TMIGD3P0DMS9 266 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GSK3AP49840 483 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 CLDN12P56749 244 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GLT8D1Q68CQ7 371 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 UTS2BQ765I0 119 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 TCTE3Q8IZS6 198 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 PAQR4Q8N4S7 273 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 OR2AJ1Q8NGZ0 328 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF671Q8TAW3 534 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 JSRP1Q96MG2 331 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 SFXN2Q96NB2 322 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 PAQR5Q9NXK6 330 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 KLF13Q9Y2Y9 288 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GPR179Q6PRD1 2367 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 WIPF3A6NGB9 483 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 H7C417 338 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 P2RY10O00398 339 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GDF1P27539 372 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 HTR2CP28335 458 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 GDNFP39905 211 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 POU3F4P49335 361 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 TMPRSS7Q7RTY8 843 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 ADGRE4PQ86SQ3 457 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 TMEM251Q8N6I4 163 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 RELTQ969Z4 430 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF837Q96EG3 531 aaPredicted RBP11.04□□□□□ -0.64
PRPF4-202ENST00000374199 CKLFQ9UBR5 152 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 B4GALT7Q9UBV7 327 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 MTFP1Q9UDX5 166 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 OTOGLQ3ZCN5 2332 aa11.04□□□□□ -0.64
PRPF4-202ENST00000374199 A0A1B0GVC2 190 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 A6NIN4 97 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ACOT7O00154 380 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 EIF1AYO14602 144 aaKnown RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 MMP7P09237 267 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CPN1P15169 458 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 POU3F2P20265 443 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 TCEA1P23193 301 aaKnown RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CX3CR1P49238 355 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 RAB35Q15286 201 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CARD17Q5XLA6 110 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 DOK3Q7L591 496 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 GLCCI1Q86VQ1 547 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ZNF433Q8N7K0 673 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 DEFB124Q8NES8 71 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ENKURQ8TC29 256 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 HPS1Q92902 700 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 HES7Q9BYE0 225 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 EMC3Q9P0I2 261 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 PCNX2A6NKB5 2137 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 FOXI3A8MTJ6 420 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 SS18L1O75177 396 aaPredicted RBP11.03□□□□□ -0.64
PRPF4-202ENST00000374199 BPNT1O95861 308 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 ACTL6AO96019 429 aa11.03□□□□□ -0.64
PRPF4-202ENST00000374199 CELA3AP09093 270 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms