RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CDH26Q8IXH8 852 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 MBOAT4Q96T53 435 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 PIAS2O75928 621 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 CAPZBP47756 277 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 PCBP3P57721 371 aaKnown RBP13.03□□□□□ -0.32
TRAF1-201ENST00000373887 PRSS35Q8N3Z0 413 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 PLA2G3Q9NZ20 509 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SLC23A1Q9UHI7 598 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 HRH3Q9Y5N1 445 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 TNFSF11O14788 317 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 CLDN22Q8N7P3 220 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 BCORP1Q8N888 145 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 CTDSP1Q9GZU7 261 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 PDFQ9HBH1 243 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 LOC102724200A0A096LPH7 203 aaPredicted RBP13.03□□□□□ -0.32
TRAF1-201ENST00000373887 GPR171O14626 319 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 SOD1P00441 154 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 GJC3Q8NFK1 279 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 BAHD1Q8TBE0 780 aaPredicted RBP13.03□□□□□ -0.32
TRAF1-201ENST00000373887 ATF6BQ99941 703 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 DOCK2Q92608 1830 aa13.03□□□□□ -0.32
TRAF1-201ENST00000373887 A0A1W2PR48 441 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 METTL12A8MUP2 240 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 ICOSLGO75144 302 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 FABP9Q0Z7S8 132 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 DOC2BQ14184 412 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 ELAVL1Q15717 326 aaKnown RBP13.02□□□□□ -0.32
TRAF1-201ENST00000373887 C1orf140Q5VVS0 124 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 FAAP20Q6NZ36 180 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 ADGRG3Q86Y34 549 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 FYTTD1Q96QD9 318 aaKnown RBP13.02□□□□□ -0.32
TRAF1-201ENST00000373887 SERGEFQ9UGK8 458 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 DAPP1Q9UN19 280 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 ZNF727A8MUV8 499 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.32
TRAF1-201ENST00000373887 PCSK6P29122 969 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 CD80P33681 288 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 ANKRD16Q6P6B7 361 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.32
TRAF1-201ENST00000373887 OR51E1Q8TCB6 317 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 TRMT61AQ96FX7 289 aaKnown RBP13.02□□□□□ -0.32
TRAF1-201ENST00000373887 TIMD4Q96H15 378 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.32
TRAF1-201ENST00000373887 GPR37O15354 613 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 CORO6Q6QEF8 472 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 C5orf46Q6UWT4 87 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 USP51Q70EK9 711 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 LYSMD2Q8IV50 215 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 LFNGQ8NES3 379 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 GPR32P1Q8NGA4 272 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 TEX37Q96LM6 180 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 S1PR3Q99500 378 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 B3GALT5Q9Y2C3 310 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 J3QR89 54 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 GLCEO94923 617 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 USF1P22415 310 aaPredicted RBP13.02□□□□□ -0.33
TRAF1-201ENST00000373887 ARNTP27540 789 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 OR51F2Q8NH61 342 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 OR8B4Q96RC9 309 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF586Q9NXT0 402 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 CTSFQ9UBX1 484 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 TOX4O94842 621 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 GLAP06280 429 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 CEACAM5P06731 702 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 ZGLP1P0C6A0 271 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 EIF1P41567 113 aaKnown RBP13.02□□□□□ -0.33
TRAF1-201ENST00000373887 RPS16P62249 146 aaKnown RBP13.02□□□□□ -0.33
TRAF1-201ENST00000373887 DPTQ07507 201 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 SPRED1Q7Z699 444 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 SFTPA1Q8IWL2 248 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 DTWD2Q8NBA8 298 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 M1APQ8TC57 530 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 EGLN1Q9GZT9 426 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 CHST6Q9GZX3 395 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 FLVCR1Q9Y5Y0 555 aa13.02□□□□□ -0.33
TRAF1-201ENST00000373887 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
TRAF1-201ENST00000373887 LALBAP00709 142 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 RFX2P48378 723 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 UBE2FQ969M7 185 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 MED18Q9BUE0 208 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
TRAF1-201ENST00000373887 A4GALTQ9NPC4 353 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 LAMB1P07942 1786 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 IL2RAP01589 272 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 RPL7P18124 248 aaKnown RBP13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CCR9P51686 369 aa13.01□□□□□ -0.33
TRAF1-201ENST00000373887 CLEC9AQ6UXN8 241 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms