RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 MLXQ9UH92 298 aa7□□□□□ -1.29
HERC4-202ENST00000373700 RALGAPA1Q6GYQ0 2036 aa7□□□□□ -1.29
HERC4-202ENST00000373700 FREM3P0C091 2139 aa7□□□□□ -1.29
HERC4-202ENST00000373700 RER1O15258 196 aa7□□□□□ -1.29
HERC4-202ENST00000373700 PTP4A3O75365 173 aa7□□□□□ -1.29
HERC4-202ENST00000373700 AGTR1P30556 359 aa7□□□□□ -1.29
HERC4-202ENST00000373700 VAMP2P63027 116 aa7□□□□□ -1.29
HERC4-202ENST00000373700 MYBPHQ13203 477 aa7□□□□□ -1.29
HERC4-202ENST00000373700 FAM189A2Q15884 450 aa7□□□□□ -1.29
HERC4-202ENST00000373700 SLC25A30Q5SVS4 291 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ZNF585AQ6P3V2 769 aa7□□□□□ -1.29
HERC4-202ENST00000373700 CREB3L2Q70SY1 520 aa7□□□□□ -1.29
HERC4-202ENST00000373700 PXKQ7Z7A4 578 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ADGRE4PQ86SQ3 457 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ZNF454Q8N9F8 522 aa7□□□□□ -1.29
HERC4-202ENST00000373700 PAQR8Q8TEZ7 354 aa7□□□□□ -1.29
HERC4-202ENST00000373700 C11orf40Q8WZ69 217 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ROBO4Q8WZ75 1007 aa7□□□□□ -1.29
HERC4-202ENST00000373700 OR8B4Q96RC9 309 aa7□□□□□ -1.29
HERC4-202ENST00000373700 MARVELD1Q9BSK0 173 aa7□□□□□ -1.29
HERC4-202ENST00000373700 NXF2Q9GZY0 626 aaKnown RBP7□□□□□ -1.29
HERC4-202ENST00000373700 MBD2Q9UBB5 411 aa7□□□□□ -1.29
HERC4-202ENST00000373700 MYOTQ9UBF9 498 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ZNF223Q9UK11 482 aaPredicted RBP7□□□□□ -1.29
HERC4-202ENST00000373700 HIF3AQ9Y2N7 669 aa7□□□□□ -1.29
HERC4-202ENST00000373700 SF3B6Q9Y3B4 125 aaKnown RBP7□□□□□ -1.29
HERC4-202ENST00000373700 MED13LQ71F56 2210 aa7□□□□□ -1.29
HERC4-202ENST00000373700 A0A0B4J2A0 478 aa7□□□□□ -1.29
HERC4-202ENST00000373700 CXCL13O43927 109 aa7□□□□□ -1.29
HERC4-202ENST00000373700 TRAPPC2P0DI81 140 aa7□□□□□ -1.29
HERC4-202ENST00000373700 TRAPPC2BP0DI82 140 aa7□□□□□ -1.29
HERC4-202ENST00000373700 EDN3P14138 238 aa7□□□□□ -1.29
HERC4-202ENST00000373700 CD53P19397 219 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ALOX5APP20292 161 aa7□□□□□ -1.29
HERC4-202ENST00000373700 PTBP1P26599 531 aaKnown RBP eCLIP7□□□□□ -1.291e-6■■□□□ 13.4
HERC4-202ENST00000373700 APOBEC1P41238 236 aaKnown RBP7□□□□□ -1.29
HERC4-202ENST00000373700 MMP15P51511 669 aa7□□□□□ -1.29
HERC4-202ENST00000373700 MAP2K6P52564 334 aa7□□□□□ -1.29
HERC4-202ENST00000373700 DOC2BQ14184 412 aa7□□□□□ -1.29
HERC4-202ENST00000373700 GK2Q14410 553 aaPredicted RBP7□□□□□ -1.29
HERC4-202ENST00000373700 TGIF1Q15583 401 aa7□□□□□ -1.29
HERC4-202ENST00000373700 CDONQ4KMG0 1287 aa7□□□□□ -1.29
HERC4-202ENST00000373700 WIPI1Q5MNZ9 446 aaPredicted RBP7□□□□□ -1.29
HERC4-202ENST00000373700 PDSS1Q5T2R2 415 aa7□□□□□ -1.29
HERC4-202ENST00000373700 NHLRC1Q6VVB1 395 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
HERC4-202ENST00000373700 GABRG1Q8N1C3 465 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ZNF687Q8N1G0 1237 aa7□□□□□ -1.29
HERC4-202ENST00000373700 SLC22A24Q8N4F4 322 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ZNF611Q8N823 705 aa7□□□□□ -1.29
HERC4-202ENST00000373700 LSMEM1Q8N8F7 131 aa7□□□□□ -1.29
HERC4-202ENST00000373700 OR51A2Q8NGJ7 313 aa7□□□□□ -1.29
HERC4-202ENST00000373700 MFSD8Q8NHS3 518 aa7□□□□□ -1.29
HERC4-202ENST00000373700 C4orf45Q96LM5 186 aa7□□□□□ -1.29
HERC4-202ENST00000373700 UTP23Q9BRU9 249 aaKnown RBP7□□□□□ -1.29
HERC4-202ENST00000373700 PCED1AQ9H1Q7 454 aa7□□□□□ -1.29
HERC4-202ENST00000373700 SHPKQ9UHJ6 478 aa7□□□□□ -1.29
HERC4-202ENST00000373700 ETV7Q9Y603 341 aa7□□□□□ -1.29
HERC4-202ENST00000373700 FANCMQ8IYD8 2048 aa7□□□□□ -1.29
HERC4-202ENST00000373700 A6NLC8 198 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 M0R036 132 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 IL32P24001 234 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 SLC6A1P30531 599 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FUT7Q11130 342 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FAM76BQ5HYJ3 339 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 SLC16A14Q7RTX9 510 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FJX1Q86VR8 437 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 AMELYQ99218 206 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 P4HTMQ9NXG6 502 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FBXO9Q9UK97 447 aaPredicted RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 HELZP42694 1942 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 RAF1P04049 648 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 S100A6P06703 90 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 UBCP0CG48 685 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 SMIM10L1P0DMW3 83 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 OPRM1P35372 400 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 CX3CR1P49238 355 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FOXK1P85037 733 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 EXOSC2Q13868 293 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 PDCD1Q15116 288 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 EMC4Q5J8M3 183 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FAM74A1Q5RGS3 127 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 EXOSC6Q5RKV6 272 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 MOB3CQ70IA8 216 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 TMPRSS7Q7RTY8 843 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 KMT5CQ86Y97 462 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 MISPQ8IVT2 679 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 IL1F10Q8WWZ1 152 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 SPACA9Q96E40 222 aaPredicted RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 SMIM10Q96HG1 83 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 PARP12Q9H0J9 701 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 GLTPQ9NZD2 209 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 NXT1Q9UKK6 140 aaKnown RBP6.99□□□□□ -1.29
HERC4-202ENST00000373700 A0A096LPE4 126 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 A0A1W2PPZ6 126 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 SLC22A23A1A5C7 686 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 TNFSF11O14788 317 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 FADS1O60427 444 aa6.99□□□□□ -1.29
HERC4-202ENST00000373700 ALX3O95076 343 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms