RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OR5AU1Q8NGC0 362 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 NEURL3Q96EH8 262 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 TNFRSF13CQ96RJ3 184 aa13.99□□□□□ -0.17
COL5A1-201ENST00000371817 H7C1C5 153 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 PEX10O60683 326 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 GPX5O75715 221 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 RHBDL1O75783 438 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TGFBR1P36897 503 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 FLT3LGP49771 235 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 SLC35A4Q96G79 324 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 LINC00597Q9H2U6 94 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 IL20Q9NYY1 176 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 LHX3Q9UBR4 397 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 SLCO3A1Q9UIG8 710 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 A0A1W2PP55 124 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TNFRSF10CO14798 259 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 AIFM1O95831 613 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CPMP14384 443 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 EXOSC7Q15024 291 aaKnown RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ABHD17BQ5VST6 288 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 LILRB1Q8NHL6 650 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 RTN4IP1Q8WWV3 396 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 UBTD1Q9HAC8 227 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ADGRL4Q9HBW9 690 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 DUXBA0A1W2PPF3 345 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TEAD2Q15562 447 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 OLIG1Q8TAK6 271 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 EDAQ92838 391 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 C1QTNF3Q9BXJ4 246 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 PARD6GQ9BYG4 376 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 RNF24Q9Y225 148 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ROBO1Q9Y6N7 1651 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CLEC18AA5D8T8 446 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 HS3ST1O14792 307 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 IL5P05113 134 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CTSAP10619 480 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 POU3F2P20265 443 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 HLXQ14774 488 aaPredicted RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM81Q6P7N7 255 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CLEC18CQ8NCF0 446 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ACVR1CQ8NER5 493 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 SMIM19Q96E16 107 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 DUSP21Q9H596 190 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 LRRC3CA6NJW4 275 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 C4orf47A7E2U8 309 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 HCRTO43612 131 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TCTAP57738 103 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CTU2Q2VPK5 515 aaKnown RBP13.98□□□□□ -0.17
COL5A1-201ENST00000371817 OR1L3Q8NH93 324 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CST4P01036 141 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 CRISP2P16562 243 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 GPM6BQ13491 265 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 TMEM128Q5BJH2 165 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 PLXDC2Q6UX71 529 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 MBD3L1Q8WWY6 194 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ERGIC1Q969X5 290 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 ANAPC16Q96DE5 110 aa13.98□□□□□ -0.17
COL5A1-201ENST00000371817 FAM87AP0C7U9 286 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 ZNF140P52738 457 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-201ENST00000371817 GLDNQ6ZMI3 551 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-201ENST00000371817 OR11L1Q8NGX0 322 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 MENTQ9BUN1 341 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 IFITM5A6NNB3 132 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 B4GALT3O60512 393 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 GPA33Q99795 319 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 LRIT1Q9P2V4 623 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 ALPK2Q86TB3 2170 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 MSL2Q9HCI7 577 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 EFSO43281 561 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 CD14P08571 375 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 GLI4P10075 376 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 IL21Q9HBE4 155 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 SCN4AP35499 1836 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 LNP1A1A4G5 178 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 ABCD4O14678 606 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 FOXO1Q12778 655 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 BCL2L2Q92843 193 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-201ENST00000371817 YIPF6Q96EC8 236 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 MBOAT4Q96T53 435 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 INSL5Q9Y5Q6 135 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 PMS2P1A4D2B8 440 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 OR52A4PA6NMU1 304 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 C1orf105O95561 183 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 EDN3P14138 238 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 AREGP15514 252 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 TSACCQ96A04 125 aaPredicted RBP13.97□□□□□ -0.17
COL5A1-201ENST00000371817 HDAC8Q9BY41 377 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 GAGE10A6NGK3 116 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 TSPAN12O95859 305 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 LIMS3P0CW19 117 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 LIMS4P0CW20 117 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 G6PCP35575 357 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 CMTM4Q8IZR5 234 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 NUP98P52948 1817 aa13.97□□□□□ -0.17
COL5A1-201ENST00000371817 WDR1O75083 606 aa13.96□□□□□ -0.17
COL5A1-201ENST00000371817 C6orf201Q7Z4U5 140 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms