RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TUBG1P23258 451 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 MSX2P35548 267 aaPredicted RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 MDH1P40925 334 aaKnown RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 ARMCX4Q5H9R4 360 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 OR4K13Q8NH42 304 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 ZNRF4Q8WWF5 429 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 ERMAPQ96PL5 475 aaPredicted RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 SLC30A2Q9BRI3 323 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 TMEM246Q9BRR3 403 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 PNRC2Q9NPJ4 139 aaKnown RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 TUBG2Q9NRH3 451 aa11.01□□□□□ -0.65
RPF1-201ENST00000370654 DDX28Q9NUL7 540 aaKnown RBP11.01□□□□□ -0.65
RPF1-201ENST00000370654 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
RPF1-201ENST00000370654 IQCF6A8MYZ5 107 aa11□□□□□ -0.65
RPF1-201ENST00000370654 TMPRSS2O15393 492 aa11□□□□□ -0.65
RPF1-201ENST00000370654 CCDC22O60826 627 aa11□□□□□ -0.65
RPF1-201ENST00000370654 ACSM4P0C7M7 580 aa11□□□□□ -0.65
RPF1-201ENST00000370654 PRTN3P24158 256 aa11□□□□□ -0.65
RPF1-201ENST00000370654 COX10Q12887 443 aa11□□□□□ -0.65
RPF1-201ENST00000370654 MAB21L1Q13394 359 aa11□□□□□ -0.65
RPF1-201ENST00000370654 ESCO2Q56NI9 601 aa11□□□□□ -0.65
RPF1-201ENST00000370654 SLC18B1Q6NT16 456 aa11□□□□□ -0.65
RPF1-201ENST00000370654 LEG1Q6P5S2 330 aa11□□□□□ -0.65
RPF1-201ENST00000370654 SMARCD3Q6STE5 483 aa11□□□□□ -0.65
RPF1-201ENST00000370654 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
RPF1-201ENST00000370654 ADCK1Q86TW2 530 aa11□□□□□ -0.65
RPF1-201ENST00000370654 KLBQ86Z14 1044 aa11□□□□□ -0.65
RPF1-201ENST00000370654 SLC26A10Q8NG04 563 aa11□□□□□ -0.65
RPF1-201ENST00000370654 APOBEC3DQ96AK3 386 aaPredicted RBP11□□□□□ -0.65
RPF1-201ENST00000370654 COQ7Q99807 217 aa11□□□□□ -0.65
RPF1-201ENST00000370654 ZNF747Q9BV97 191 aa11□□□□□ -0.65
RPF1-201ENST00000370654 OR52D1Q9H346 318 aa11□□□□□ -0.65
RPF1-201ENST00000370654 NTN4Q9HB63 628 aa11□□□□□ -0.65
RPF1-201ENST00000370654 AURKCQ9UQB9 309 aa11□□□□□ -0.65
RPF1-201ENST00000370654 POLR1DQ9Y2S0 133 aa11□□□□□ -0.65
RPF1-201ENST00000370654 FAM32AQ9Y421 112 aaKnown RBP11□□□□□ -0.65
RPF1-201ENST00000370654 A0A1B0GWJ7 208 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 OR6C68A6NDL8 312 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 GGT2P36268 569 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 RPS27P42677 84 aaKnown RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 RPS6KA3P51812 740 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 BAMBIQ13145 260 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 GK2Q14410 553 aaPredicted RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 SLC9A3R2Q15599 337 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 RFX4Q33E94 735 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 PRAMEF6Q5VXH4 476 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 LYPD4Q6UWN0 246 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 GJC3Q8NFK1 279 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 OR10S1Q8NGN2 331 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 OR13G1Q8NGZ3 307 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 SGMS2Q8NHU3 365 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 FANK1Q8TC84 345 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 COG8Q96MW5 612 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 ZNF582Q96NG8 517 aaPredicted RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 CDADC1Q9BWV3 514 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 SSBP3Q9BWW4 388 aaPredicted RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 RPRD1BQ9NQG5 326 aaKnown RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
RPF1-201ENST00000370654 ADA2Q9NZK5 511 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 OR5V1Q9UGF6 321 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 ATPIF1Q9UII2 106 aa10.99□□□□□ -0.65
RPF1-201ENST00000370654 MGAM2Q2M2H8 2515 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 IGHV2-70DA0A0C4DH43 119 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 F5H5K5 113 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 SURF4O15260 269 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 RPS2P15880 293 aaKnown RBP10.98□□□□□ -0.65
RPF1-201ENST00000370654 RGS6P49758 472 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 SPIBQ01892 262 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 MPPED2Q15777 294 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 ZNF404Q494X3 552 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 CLEC12AQ5QGZ9 265 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 SLC35F1Q5T1Q4 408 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 SLC27A4Q6P1M0 643 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 ZNF841Q6ZN19 808 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 MUC20Q8N307 709 aaPredicted RBP10.98□□□□□ -0.65
RPF1-201ENST00000370654 PARP8Q8N3A8 854 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 SDR9C7Q8NEX9 313 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 OR52E2Q8NGJ4 325 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 RAB40AQ8WXH6 277 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 ZMYND19Q96E35 227 aaPredicted RBP10.98□□□□□ -0.65
RPF1-201ENST00000370654 MAP6Q96JE9 813 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 MRI1Q9BV20 369 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 HDHD2Q9H0R4 259 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 LRCH1Q9Y2L9 728 aa10.98□□□□□ -0.65
RPF1-201ENST00000370654 TRAV40A0A0B4J280 105 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 C22orf46C9J442 243 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 J3QW42 95 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 ARPC3O15145 178 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 FAM20BO75063 409 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 FCN3O75636 299 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 GADD45GO95257 159 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 PLATP00750 562 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 FPR3P25089 353 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 CRABP1P29762 137 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 PYCR1P32322 319 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 GSSP48637 474 aa10.97□□□□□ -0.65
RPF1-201ENST00000370654 SRP9P49458 86 aaKnown RBP10.97□□□□□ -0.65
RPF1-201ENST00000370654 RAD23AP54725 363 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms