RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PTTG3PQ9NZH4 202 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 CDC42EP3Q9UKI2 254 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 KCNS2Q9ULS6 477 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 COMMD3-BMI1R4GMX3 469 aa16.07■□□□□ 0.16
CKS1B-203ENST00000368439 GNGT2O14610 69 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 TPD52L2O43399 206 aaKnown RBP16.06■□□□□ 0.16
CKS1B-203ENST00000368439 GYPBP06028 91 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 SPI1P17947 270 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 GRK5P34947 590 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 ECH1Q13011 328 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 ZMAT1Q5H9K5 638 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 LINC01590Q5TEZ4 76 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 NAA40Q86UY6 237 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 IQCF1Q8N6M8 205 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 LINC01356Q8N9X3 169 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 ELMOD3Q96FG2 381 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 PITX2Q99697 317 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 HCAR1Q9BXC0 346 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 NARFLQ9H6Q4 476 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 NTN4Q9HB63 628 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 DNAJB9Q9UBS3 223 aa16.06■□□□□ 0.16
CKS1B-203ENST00000368439 FAM157AC9JC47 383 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 ZNF823P16415 610 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 PRKACGP22612 351 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 ANOS1P23352 680 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 HNRNPA0Q13151 305 aaKnown RBP16.05■□□□□ 0.16
CKS1B-203ENST00000368439 AVPI1Q5T686 147 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 ACSM5Q6NUN0 579 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 ZNF511Q8NB15 262 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 OR5L1Q8NGL2 311 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 TEX47Q8TBZ9 253 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 DDX28Q9NUL7 540 aaKnown RBP16.05■□□□□ 0.16
CKS1B-203ENST00000368439 TREM2Q9NZC2 230 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 WIPI2Q9Y4P8 454 aa16.05■□□□□ 0.16
CKS1B-203ENST00000368439 FBN1P35555 2871 aaKnown RBP16.05■□□□□ 0.16
CKS1B-203ENST00000368439 F5H5K5 113 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 H3BN98 237 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 FAM157CP0CG43 387 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 OTX1P32242 354 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-203ENST00000368439 TNFAIP6P98066 277 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-203ENST00000368439 MVKQ03426 396 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 HFEQ30201 348 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 TEX30Q5JUR7 227 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 FAM120AOSQ5T036 256 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 OR2T2Q6IF00 324 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 UTP4Q969X6 686 aaKnown RBP16.04■□□□□ 0.16
CKS1B-203ENST00000368439 EGLN1Q9GZT9 426 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 YY1AP1Q9H869 796 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 LPAR3Q9UBY5 353 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 ATRQ13535 2644 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 MXRA5Q9NR99 2828 aa16.04■□□□□ 0.16
CKS1B-203ENST00000368439 FAM183AA6NL82 134 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 RIIAD1A6NNX1 92 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 CLDN25C9JDP6 229 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 E2F6O75461 281 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 IFNGP01579 166 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 OSMP13725 252 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 FMO3P31513 532 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 RBMXP38159 391 aaKnown RBP16.03■□□□□ 0.16
CKS1B-203ENST00000368439 ENTPD1P49961 510 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 CDK5Q00535 292 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 IL17RELQ6ZVW7 336 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 DCXRQ7Z4W1 244 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 OR5AS1Q8N127 324 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 OR2Z1Q8NG97 314 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 ST7LQ8TDW4 575 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 CCL17Q92583 94 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 BEX2Q9BXY8 128 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 SHARPINQ9H0F6 387 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 MED20Q9H944 212 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 DCAF16Q9NXF7 216 aa16.03■□□□□ 0.16
CKS1B-203ENST00000368439 A0A1B0GWJ7 208 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 IQCF6A8MYZ5 107 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 B4DSR2 109 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 ZNF593O00488 134 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-203ENST00000368439 DEAF1O75398 565 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-203ENST00000368439 TIPRLO75663 272 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 ATP5HO75947 161 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 ANXA8P13928 327 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 ZNF3P17036 446 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 DVL1P1P54792 670 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-203ENST00000368439 GK2Q14410 553 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-203ENST00000368439 GINS1Q14691 196 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 CR1LQ2VPA4 569 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 SLC27A4Q6P1M0 643 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 SHQ1Q6PI26 577 aaKnown RBP16.02■□□□□ 0.16
CKS1B-203ENST00000368439 OR8G5Q8NG78 346 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 NRBF2Q96F24 287 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 MDFIQ99750 246 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 MARCH7Q9H992 704 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 IL19Q9UHD0 177 aa16.02■□□□□ 0.16
CKS1B-203ENST00000368439 C5orf63A6NC05 138 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 M0R135 149 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 MLNRO43193 412 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 LCATP04180 440 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 SPARCP09486 303 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 POU1F1P28069 291 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 RASSF2P50749 326 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 BLVRAP53004 296 aa16.01■□□□□ 0.15
CKS1B-203ENST00000368439 TPTEP56180 551 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms