RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ZNF239Q16600 458 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PDLIM3Q53GG5 364 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TRILQ7L0X0 811 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LRRC28Q86X40 367 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 C3orf56Q8N813 242 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 YIPF5Q969M3 257 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 RAB24Q969Q5 203 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ADOQ96SZ5 270 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SRRQ9GZT4 340 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CYSLTR2Q9NS75 346 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 A0A0D9SEW6 157 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR52A4PA6NMU1 304 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 F2RL2O00254 374 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SMAD7O15105 426 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 DOK2O60496 412 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CSF3P09919 207 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PRDX3P30048 256 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR3A1P47881 315 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ADPRHP54922 357 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 GALNT2Q10471 571 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 RPL7L1Q6DKI1 246 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PIANPQ8IYJ0 282 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 BATF2Q8N1L9 274 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF680Q8NEM1 530 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR5AK2Q8NH90 309 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR4C12Q96R67 309 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LYSMD1Q96S90 227 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 GINS3Q9BRX5 216 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LRFN3Q9BTN0 628 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 DERL2Q9GZP9 239 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 WNT5BQ9H1J7 359 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 AJAP1Q9UKB5 411 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CBLCQ9ULV8 474 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 NFS1Q9Y697 457 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TNS1Q9HBL0 1735 aaKnown RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 SPTA1P02549 2419 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 F5H5K5 113 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 H7BYZ3 331 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 YIF1AO95070 293 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 NXPH2O95156 264 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 HSD17B1P14061 328 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 S100A11P31949 105 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CSF2RBP32927 897 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 MC5RP33032 325 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 GPR6P46095 362 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 STC1P52823 247 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TAS2R38P59533 333 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TAS2R19P59542 299 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 LCN6P62502 163 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM267Q0VDI3 215 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 TAF9Q16594 264 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF793Q6ZN11 406 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 CLDN19Q8N6F1 224 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR5M9Q8NGP3 310 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 OR10X1Q8NGY0 326 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 NEURL2Q9BR09 285 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 HEXA-AS1Q9H8Q6 139 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PLSCR3Q9NRY6 295 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 PCOLCE2Q9UKZ9 415 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 POLDIP2Q9Y2S7 368 aa7.89□□□□□ -1.15
SYNE1-206ENST00000367253 M0R1X1 148 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SDHDO14521 159 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 MSTNO14793 375 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SLC16A6O15403 523 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 NME2P22392 152 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PDLIM4P50479 330 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 AESQ08117 197 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SQSTM1Q13501 440 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 C9orf135Q5VTT2 229 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 LHFPL4Q7Z7J7 247 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 LRRTM1Q86UE6 522 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PRR22Q8IZ63 422 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR2C3Q8N628 320 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 CELF2-AS1Q8N7Q2 184 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ST6GALNAC3Q8NDV1 305 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 OR52P1PQ8NH57 321 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 RSRP1Q9BUV0 290 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM59Q9BXS4 323 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 DUSP15Q9H1R2 295 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 FBXO34Q9NWN3 711 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 COL11A2P13942 1736 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 HELTA6NFD8 242 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 GLOD5A6NK44 160 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF487B1APH4 448 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 CNMDO75829 334 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 SERPINA5P05154 406 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 FGF3P11487 239 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-206ENST00000367253 RFX2P48378 723 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 RAB9AP51151 201 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 MMP15P51511 669 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 P2RX1P51575 399 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 FAM189BP81408 668 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF74Q16587 644 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 NKAIN2Q5VXU1 208 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 VASNQ6EMK4 673 aa7.88□□□□□ -1.15
SYNE1-206ENST00000367253 PLXDC2Q6UX71 529 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms