RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 PSTPIP1O43586 416 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IGHV1-46P01743 117 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IGHG2P01859 326 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MT-ND4P03905 459 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MAS1P04201 325 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 THRAP10827 490 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 EPB41P11171 864 aaKnown RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 GZMHP20718 246 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CCL23P55773 120 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KLF3P57682 345 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ACTG2P63267 376 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TGM3Q08188 693 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ILKQ13418 452 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC25A35Q3KQZ1 300 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LUZP6Q538Z0 58 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MRPL2Q5T653 305 aaKnown RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 Q6ZPB1 254 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC25A48Q6ZT89 311 aaKnown RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DHDDSQ86SQ9 333 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CPNE9Q8IYJ1 553 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LINC00469Q8N7U9 141 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DNAAF3Q8N9W5 541 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CHST4Q8NCG5 386 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 B3GNT7Q8NFL0 401 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RAB3IL1Q8TBN0 382 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CPNE4Q96A23 557 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OTUB2Q96DC9 234 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MICU1Q9BPX6 476 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SLC39A3Q9BRY0 314 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TPPP3Q9BW30 176 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TOLLIPQ9H0E2 274 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DSN1Q9H410 356 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MED4Q9NPJ6 270 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 POLE4Q9NR33 117 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FBXO8Q9NRD0 319 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CLN8Q9UBY8 286 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ST3GAL6Q9Y274 331 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DDX49Q9Y6V7 483 aaKnown RBP0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ICE1Q9Y2F5 2266 aa0.25□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MROH5Q6ZUA9 1318 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IGHV1-69DA0A0B4J2H0 117 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LY6LH3BQJ8 138 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 K7EMT4 169 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FGGP02679 453 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MT-ND3P03897 115 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TROVE2P10155 538 aaKnown RBP eCLIP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NELFEP18615 380 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OTX1P32242 354 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ATP6V1E1P36543 226 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CAMLGP49069 296 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CCT3P49368 545 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CSNK1EP49674 416 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CDH6P55285 790 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 GPX6P59796 221 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 IRX3P78415 501 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MRPS22P82650 360 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FMODQ06828 376 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR7A5Q15622 319 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ZNF77Q15935 545 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PDK4Q16654 411 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 EXOC3L2Q2M3D2 409 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FAM104BQ5XKR9 115 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 EIF4E3Q8N5X7 224 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 UBAC2Q8NBM4 344 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 STEAP2Q8NFT2 490 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR4C13Q8NGP0 309 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 OR1L1Q8NH94 360 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RNASE11Q8TAA1 199 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 ZNF420Q8TAQ5 688 aaPredicted RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LRRC29Q8WV35 223 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TMEM230Q96A57 120 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 C10orf35Q96D05 121 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 TMEM237Q96Q45 408 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PANX2Q96RD6 677 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 POLE3Q9NRF9 147 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CTNNA3Q9UI47 895 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 RWDD2AQ9UIY3 292 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 SH3BGRL2Q9UJC5 107 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PEX16Q9Y5Y5 336 aa0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 BAZ2AQ9UIF9 1905 aaKnown RBP0.24□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MYO9BQ13459 2157 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 LTBP2Q14767 1821 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PDZK1P1A8MUH7 402 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PRPSAP2O60256 369 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KCNK2O95069 426 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 C1orf105O95561 183 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 NRASP01111 189 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 HRASP01112 189 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 KRASP01116 189 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 UGT2B4P06133 528 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 CD28P10747 220 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 GAP43P17677 238 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 MAPK3P27361 379 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 HTR1DP28221 377 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FOXN2P32314 431 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 UQCRFS1P47985 274 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PRR3P79522 188 aaKnown RBP0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 PRB3Q04118 309 aaPredicted RBP0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 FGL1Q08830 312 aa0.23□□□□□ -2.37
RNU6-1048P-201ENST00000364054 DOC2AQ14183 400 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms