RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 FLVCR2Q9UPI3 526 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 MYO10Q9HD67 2058 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 M0R135 149 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 OPRM1P35372 400 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ACOT6Q3I5F7 207 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 TSLPQ969D9 159 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 RPUSD4Q96CM3 377 aaKnown RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 TRMT61AQ96FX7 289 aaKnown RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ZNF799Q96GE5 643 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 HES7Q9BYE0 225 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ZDHHC5Q9C0B5 715 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 NIT2Q9NQR4 276 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 ASIC5Q9NY37 505 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 OR7C2O60412 319 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 SLC19A1P41440 591 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 TAS2R45P59539 299 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 OR10AD1Q8NGE0 317 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 AKR1E2Q96JD6 320 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 PIGMQ9H3S5 423 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 PSENENQ9NZ42 101 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 GALR2O43603 387 aaPredicted RBP16.71■□□□□ 0.27
SHANK1-202ENST00000359082 SULT1C4O75897 302 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 IL2RAP01589 272 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 PI3P19957 117 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 OR10P1Q8NGE3 313 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 NDFIP1Q9BT67 221 aa16.71■□□□□ 0.27
SHANK1-202ENST00000359082 IGLV3-10A0A075B6K4 115 aa16.71■□□□□ 0.26
SHANK1-202ENST00000359082 BTG1P62324 171 aa16.71■□□□□ 0.26
SHANK1-202ENST00000359082 RPL18Q07020 188 aaKnown RBP16.71■□□□□ 0.26
SHANK1-202ENST00000359082 LYSMD1Q96S90 227 aa16.71■□□□□ 0.26
SHANK1-202ENST00000359082 PBOV1Q9GZY1 135 aa16.71■□□□□ 0.26
SHANK1-202ENST00000359082 DUSP22Q9NRW4 184 aa16.71■□□□□ 0.26
SHANK1-202ENST00000359082 NID1P14543 1247 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 PRR27Q6MZM9 219 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 ATF6BQ99941 703 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 NUDT9Q9BW91 350 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 MOB1AQ9H8S9 216 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 LIN7CQ9NUP9 197 aaKnown RBP16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TIMM9Q9Y5J7 89 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TCAPO15273 167 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 ERHP84090 104 aaKnown RBP16.7■□□□□ 0.26
SHANK1-202ENST00000359082 GLCCI1Q86VQ1 547 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TECTBQ96PL2 329 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF835Q9Y2P0 537 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 EMC4Q5J8M3 183 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 SSX7Q7RTT5 188 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 OR13D1Q8NGV5 346 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 IDSB3KWA1 339 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 PTBP1P26599 531 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF816Q0VGE8 651 aaPredicted RBP16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TAAR5O14804 337 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 HRH1P35367 487 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TGFBR1P36897 503 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 PCBP3P57721 371 aaKnown RBP16.7■□□□□ 0.26
SHANK1-202ENST00000359082 MENTQ9BUN1 341 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 OR51I2Q9H344 312 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 NDUFB11Q9NX14 153 aa16.7■□□□□ 0.26
SHANK1-202ENST00000359082 TMEM129A0AVI4 362 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 JUNBP17275 347 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 PXDC1Q5TGL8 231 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 AFMIDQ63HM1 303 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF573Q86YE8 665 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ZDHHC23Q8IYP9 409 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 OR5M8Q8NGP6 311 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 LRP3O75074 770 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 BPIFB3P59826 476 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF787Q6DD87 383 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 SIGLECL1Q8N7X8 197 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ZNF251Q9BRH9 671 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 HINT3Q9NQE9 182 aaKnown RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 MED29Q9NX70 200 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 CLDN15P56746 228 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 INSM1Q01101 510 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 CLEC12BQ2HXU8 276 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ROBO4Q8WZ75 1007 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 FBXW5Q969U6 566 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 PMS2P1A4D2B8 440 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 SHISA7A6NL88 538 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 PDGFBP01127 241 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 FKBP2P26885 142 aaKnown RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 HAAOP46952 286 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 DUSP8Q13202 625 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 RPUSD3Q6P087 351 aaKnown RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 DRAM2Q6UX65 266 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 ETFBKMTQ8IXQ9 262 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 CMTM4Q8IZR5 234 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 KCNE4Q8WWG9 221 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 CCDC74BQ96LY2 380 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 MED18Q9BUE0 208 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 S1PR5Q9H228 398 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 KLF13Q9Y2Y9 288 aaPredicted RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 RPS27P42677 84 aaKnown RBP16.69■□□□□ 0.26
SHANK1-202ENST00000359082 XKR7Q5GH72 579 aa16.69■□□□□ 0.26
SHANK1-202ENST00000359082 H7BYZ3 331 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 CD22P20273 847 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 DTWD2Q8NBA8 298 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 TMED6Q8WW62 240 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 OXGR1Q96P68 337 aa16.68■□□□□ 0.26
SHANK1-202ENST00000359082 OR2A14Q96R47 310 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms