RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ISG20L2Q9H9L3 353 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 CMC2Q9NRP2 79 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 LHX6Q9UPM6 363 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF320A2RRD8 509 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MAP1LC3B2A6NCE7 125 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HOXD9P28356 352 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 PRRT2Q7Z6L0 340 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 THNSL2Q86YJ6 484 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ETFBKMTQ8IXQ9 262 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 KDF1Q8NAX2 398 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF845Q96IR2 970 aaPredicted RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 HHIPQ96QV1 700 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 ADAT1Q9BUB4 502 aaKnown RBP5.55□□□□□ -1.52
VPS13B-203ENST00000358544 GPR61Q9BZJ8 451 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 MAP1LC3BQ9GZQ8 125 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 SLC23A2Q9UGH3 650 aa5.55□□□□□ -1.52
VPS13B-203ENST00000358544 DRGXA6NNA5 263 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CD82P27701 267 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DIO1P49895 249 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR5I1Q13606 314 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 C22orf15Q8WYQ4 148 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TSSK2Q96PF2 358 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF552Q9H707 407 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1B0GUL6 1792 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF816-ZNF321PA0A0X1KG74 233 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 F12P00748 615 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LIMK1P53667 647 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF321PQ8N8H1 164 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SHARPINQ9H0F6 387 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PRR35P0CG20 571 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LAMTOR1Q6IAA8 161 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PGBD5Q8N414 524 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TCTEX1D1Q8N7M0 179 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR5D18Q8NGL1 313 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR5AR1Q8NGP9 310 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TM4SF18Q96CE8 201 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 Q9N2K0 584 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR52A1Q9UKL2 312 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 FITM1A5D6W6 292 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SERINC4A6NH21 518 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ARG1P05089 322 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ICAM2P13598 275 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PI3P19957 117 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DTYMKP23919 212 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 INSL4Q14641 139 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR5D14Q8NGL3 314 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 M0R1X1 148 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 HOXC13P31276 330 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DLK1P80370 383 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SERINC5Q86VE9 423 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LDLRAD3Q86YD5 345 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DDIT4LQ96D03 193 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF275Q9NSD4 429 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 YTHDF2Q9Y5A9 579 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 H0Y8G0 127 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 EOMESO95936 686 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CARD18P57730 90 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DHRS7BQ6IAN0 325 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 KCNJ15Q99712 375 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PLK3Q9H4B4 646 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 MED1Q15648 1581 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 KDM3BQ7LBC6 1761 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 OR52A4PA6NMU1 304 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 HHLA1C9JL84 531 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 MFNGO00587 321 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PPM1DO15297 605 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LEMD1Q68G75 181 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ALKBH2Q6NS38 261 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PTGESO14684 152 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DTD2Q96FN9 168 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 DCBLD2Q96PD2 775 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SERINC2Q96SA4 455 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 LINC00597Q9H2U6 94 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 GLIPR2Q9H4G4 154 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CA10Q9NS85 328 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SLC6A13Q9NSD5 602 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 NXT1Q9UKK6 140 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 C1QAP02745 245 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 HPXP02790 462 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CDX1P47902 265 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 GSK3AP49840 483 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ELAVL1Q15717 326 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 C8orf82Q6P1X6 216 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SLC35G3Q8N808 338 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 PRRX2Q99811 253 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CTDSP1Q9GZU7 261 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 FBXL17Q9UF56 701 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 RCL1Q9Y2P8 373 aaKnown RBP5.54□□□□□ -1.52
VPS13B-203ENST00000358544 A0A0U1RQF3 1178 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 H3BQ15 152 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 MAN2B1O00754 1011 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TP53I11O14683 189 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 SLC10A1Q14973 349 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM104Q8NE00 496 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ROBO1Q9Y6N7 1651 aa5.54□□□□□ -1.52
VPS13B-203ENST00000358544 ADH5P11766 374 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms