RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KBTBD8Q8NFY9 601 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 DCLRE1CQ96SD1 692 aaKnown RBP13.19□□□□□ -0.3
TPM1-206ENST00000358278 JAM3Q9BX67 310 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 NIPAL2Q9H841 368 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 GNG8Q9UK08 70 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 SPEF1Q9Y4P9 236 aa13.19□□□□□ -0.3
TPM1-206ENST00000358278 APOC1P02654 83 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 FAM157BP0CG42 384 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
TPM1-206ENST00000358278 MVKQ03426 396 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 SNTB2Q13425 540 aaKnown RBP13.18□□□□□ -0.3
TPM1-206ENST00000358278 TP53I3Q53FA7 332 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 UNQ6126/PRO20091Q6UXV3 157 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 DOK1Q99704 481 aa13.18□□□□□ -0.3
TPM1-206ENST00000358278 PAK1IP1Q9NWT1 392 aaPredicted RBP13.18□□□□□ -0.3
TPM1-206ENST00000358278 MRM2Q9UI43 246 aaKnown RBP13.18□□□□□ -0.3
TPM1-206ENST00000358278 DSCAMO60469 2012 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 METTL15A6NJ78 407 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 SULT1C4O75897 302 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 CDK1P06493 297 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ANXA2P07355 339 aaKnown RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 LOXP28300 417 aaPredicted RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 PCSK6P29122 969 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 WNT5AP41221 380 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ETV1P50549 477 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 PSMA6P60900 246 aaKnown RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 HGFACQ04756 655 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 RSPO1Q2MKA7 263 aaPredicted RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 ZNF829Q3KNS6 432 aaPredicted RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 KRTAP27-1Q3LI81 207 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 CDONQ4KMG0 1287 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 DRAM2Q6UX65 266 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ZNF704Q6ZNC4 412 aaPredicted RBP13.17□□□□□ -0.3
TPM1-206ENST00000358278 ZNF101Q8IZC7 436 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ABHD4Q8TB40 342 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 C4orf36Q96KX1 117 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 N6AMT1Q9Y5N5 214 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ATP23Q9Y6H3 246 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
TPM1-206ENST00000358278 RAI1Q7Z5J4 1906 aaPredicted RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 J3QLW9 94 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 MYL12BO14950 172 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RGS10O43665 173 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 SMPD2O60906 423 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RPP14O95059 124 aaKnown RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 PLAUP00749 431 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 LCATP04180 440 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 ADRA2AP08913 450 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 TACSTD2P09758 323 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 LIMS3P0CW19 117 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 LIMS4P0CW20 117 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 SLC2A1P11166 492 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 ZNF19P17023 458 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 NR4A1P22736 598 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RAD52P43351 418 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RGS6P49758 472 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 UCP2P55851 309 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 TMPRSS11AQ6ZMR5 421 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 KCTD20Q7Z5Y7 419 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 TMEM200AQ86VY9 491 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 KLHL36Q8N4N3 616 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 SGCDQ92629 289 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 APOBEC3DQ96AK3 386 aaPredicted RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 YTHDF1Q9BYJ9 559 aaKnown RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 BCL2L14Q9BZR8 327 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 ACOXLQ9NUZ1 547 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 GTF2A1LQ9UNN4 478 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 LCKP06239 509 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 DCTDP32321 178 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 OR12D2P58182 307 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 ZNF121P58317 390 aaPredicted RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 GABARAPL2P60520 117 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 ZNF684Q5T5D7 378 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 LIPNQ5VXI9 398 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 VHLLQ6RSH7 139 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 RFPL4BQ6ZWI9 263 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 NAA40Q86UY6 237 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 MARVELD3Q96A59 401 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 TMEM204Q9BSN7 226 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 ERVK-18Q9QC07 812 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 CLEC2DQ9UHP7 191 aa13.16□□□□□ -0.3
TPM1-206ENST00000358278 CAB39Q9Y376 341 aaPredicted RBP13.16□□□□□ -0.3
TPM1-206ENST00000358278 CACNA1DQ01668 2161 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 TMEM269A0A1B0GVZ9 245 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 ICMTO60725 284 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 CTAG2O75638 210 aa13.15□□□□□ -0.3
TPM1-206ENST00000358278 NGFP01138 241 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms