RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 NAXDQ8IW45 347 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 GABRG1Q8N1C3 465 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SNAPC3Q92966 411 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SLCO5A1Q9H2Y9 848 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ADAM20O43506 726 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SLCO2B1O94956 709 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 TAGLN2P37802 199 aaKnown RBP6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SNRPNP63162 240 aaKnown RBP6.65□□□□□ -1.35
VPS13A-202ENST00000357409 TLE4Q04727 773 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RPL18Q07020 188 aaKnown RBP6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RNF151Q2KHN1 245 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 LACC1Q8IV20 430 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 MAP6Q96JE9 813 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RTL8AQ9BWD3 113 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 TGIF2Q9GZN2 237 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 PRELID3BQ9Y3B1 194 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ADGRB1O14514 1584 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 H0YIG0 161 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FCGR3BO75015 233 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SBK3P0C264 359 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 PXDC1Q5TGL8 231 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SPIN2AQ99865 258 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SPIN2BQ9BPZ2 258 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 MAGIXQ9H6Y5 334 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 MOKQ9UQ07 419 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SDK1Q7Z5N4 2213 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 NRASP01111 189 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SLC35E2P0CK97 266 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 MMP12P39900 470 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ETV1P50549 477 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 HIST2H3AQ71DI3 136 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 OR4C3Q8NH37 302 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SH2D1BO14796 132 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 NAGAP17050 411 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ACHEP22303 614 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 HTR3AP46098 478 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FAM74A1Q5RGS3 127 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 KIRREL2Q6UWL6 708 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SPRED1Q7Z699 444 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 UBE3DQ7Z6J8 389 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FAM26EQ8N5C1 309 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 NR4A3Q92570 626 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 TAAR9Q96RI9 348 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 A0A1W2PRX2 142 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 UNCXA6NJT0 531 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FIGNL2A6NMB9 653 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 A8MVM7 634 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FABP7O15540 132 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ABCD3P28288 659 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 GPR12P47775 334 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 NRARPQ7Z6K4 114 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FUNDC1Q8IVP5 155 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF583Q96ND8 569 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FOXB1Q99853 325 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 HDAC8Q9BY41 377 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 BCO1Q9HAY6 547 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ADGRL4Q9HBW9 690 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SLCO1C1Q9NYB5 712 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM131LA2VDJ0 1609 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 M0R1X1 148 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 FAM198BQ6UWH4 519 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 RETREG3Q86VR2 466 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 MUC15Q8N387 334 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 CPPED1Q9BRF8 314 aaPredicted RBP6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF251Q9BRH9 671 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 OR51J1Q9H342 316 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 OR2A1Q8NGT9 310 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ZG16BQ96DA0 208 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 NSG2Q9Y328 171 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 XRCC2O43543 280 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SELEP16581 610 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 DUSP8Q13202 625 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF169Q14929 603 aaPredicted RBP6.64□□□□□ -1.35
VPS13A-202ENST00000357409 MPEG1Q2M385 716 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 CATSPERDQ86XM0 798 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ADAT1Q9BUB4 502 aaKnown RBP6.64□□□□□ -1.35
VPS13A-202ENST00000357409 UPK1AO00322 258 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF92Q03936 586 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SIAH3Q8IW03 269 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 OR1J2Q8NGS2 313 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 RND1Q92730 232 aa6.64□□□□□ -1.35
VPS13A-202ENST00000357409 POP5Q969H6 163 aaKnown RBP6.64□□□□□ -1.35
VPS13A-202ENST00000357409 SLC22A23A1A5C7 686 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF195O14628 629 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 IGHEP01854 428 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM65Q6PI78 240 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 MARCH1Q8TCQ1 289 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 RNF128Q8TEB7 428 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 B3GAT1Q9P2W7 334 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 RER1O15258 196 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 UPK1BO75841 260 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 CT62P0C5K7 136 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 OPRK1P41145 380 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 ERGIC1Q969X5 290 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 FAM3DQ96BQ1 224 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 C1orf123Q9NWV4 160 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 SLC17A4Q9Y2C5 497 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 KAT6AQ92794 2004 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 TMSB15BA0A087X1C1 80 aa6.63□□□□□ -1.35
VPS13A-202ENST00000357409 CCDC187A0A096LP49 1063 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms