RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 IVDP26440 423 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF750Q32MQ0 723 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 VN1R2Q8NFZ6 395 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 LRFN3Q9BTN0 628 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 IGHV3-15A0A0B4J1V0 119 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF716A6NP11 495 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 GPR31O00270 319 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 SBK2P0C263 348 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 PXDC1Q5TGL8 231 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 GABARAPL1Q9H0R8 117 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 ZNF354AO60765 605 aaPredicted RBP5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 PPP1CBP62140 327 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 RDH5Q92781 318 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 Q96M85 177 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 SMIM21Q3B7S5 101 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 PDLIM5Q96HC4 596 aaKnown RBP5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 SMIM7Q9BQ49 75 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 CLEC1BQ9P126 229 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 ARHGEF28Q8N1W1 1705 aaKnown RBP5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 OR2J2O76002 312 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 NID1P14543 1247 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 SOX18P35713 384 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 HCCSP53701 268 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 VASH2Q86V25 355 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 CLDN22Q8N7P3 220 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 OR52N1Q8NH53 320 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 ATOH8Q96SQ7 321 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 DDOQ99489 341 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 TMEM147Q9BVK8 224 aa5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 DIMT1Q9UNQ2 313 aaKnown RBP5.28□□□□□ -1.56
SRGAP1-201ENST00000355086 TEX50A0A1B0GTY4 177 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 FITM1A5D6W6 292 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 F5H697 171 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 M0R082 166 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CSNK1G2P78368 415 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 KCNAB1Q14722 419 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 HSF5Q4G112 596 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 C17orf99Q6UX52 265 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 OR4A4PQ8NGN8 299 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 OR51E1Q8TCB6 317 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 LRRC15Q8TF66 581 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SPEF2Q9C093 1822 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 FPR3P25089 353 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 TPMTP51580 245 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ERVFC1P60507 584 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 FCN2Q15485 313 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 BCL2L2Q92843 193 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 TM4SF18Q96CE8 201 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ACOXLQ9NUZ1 547 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 OR2F2O95006 317 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SNRPGP62308 76 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 OR2F1Q13607 317 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 DUSP6Q16828 381 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 LILRB1Q8NHL6 650 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ACY3Q96HD9 319 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 MS4A8Q9BY19 250 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 NUDT19A8MXV4 375 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CD276Q5ZPR3 534 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ST8SIA4Q92187 359 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 WBP2Q969T9 261 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 WDR61Q9GZS3 305 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 C11orf54Q9H0W9 315 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ZNF576Q9H609 170 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CNN1P51911 297 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ZNF534Q76KX8 674 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SYT5O00445 386 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 LIM2P55344 173 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 HTRA3P83110 453 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SLAMF6Q96DU3 332 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 C12orf10Q9HB07 376 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ONECUT2O95948 504 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 OR5H8P0DN80 308 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 PCSK6P29122 969 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SLC48A1Q6P1K1 146 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CCDC74AQ96AQ1 378 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 TXLNGYQ9BZA5 131 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 BMPR1BO00238 502 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 TRIM23P36406 574 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 JAG1P78504 1218 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 SIX1Q15475 284 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 RGS7BPQ6MZT1 257 aaPredicted RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 BTNL3Q6UXE8 466 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 BCDIN3DQ7Z5W3 292 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 AMIGO3Q86WK7 504 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 HAPLN2Q9GZV7 340 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 GAL3ST2Q9H3Q3 398 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CBY1Q9Y3M2 126 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CLEC18AA5D8T8 446 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 TMEM189-UBE2V1I3L0A0 370 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 ACOT8O14734 319 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 NPY1RP25929 384 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CD27P26842 260 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CD80P33681 288 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CELF2-AS1Q8N7Q2 184 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CLEC18CQ8NCF0 446 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 CEP290O15078 2479 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 UBE2L5PA0A1B0GUS4 154 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 VAMP5O95183 116 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 HPP00738 406 aa5.27□□□□□ -1.57
SRGAP1-201ENST00000355086 RANP62826 216 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms