RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TMEM269A0A1B0GVZ9 245 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 ZNF840PA6NDX5 716 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 OR4C45A6NMZ5 311 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PEX12O00623 359 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 GEMIN2O14893 280 aaKnown RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 GMFGO60234 142 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 CRYABP02511 175 aaKnown RBP11.9□□□□□ -0.5
IFT88-202ENST00000351808 TACSTD2P09758 323 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PGA5P0DJD9 388 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 CAMLGP49069 296 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PRLHRP49683 370 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 UCP2P55851 309 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 GXYLT1Q4G148 440 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 DCAF10Q5QP82 559 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 SAPCD1Q5SSQ6 148 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 MTSS1LQ765P7 747 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 ZNF679Q8IYX0 411 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 RSC1A1Q92681 617 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 CUTCQ9NTM9 273 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 SAGE1Q9NXZ1 904 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 PADI3Q9ULW8 664 aa11.9□□□□□ -0.5
IFT88-202ENST00000351808 TICRRQ7Z2Z1 1910 aa11.9□□□□□ -0.51
IFT88-202ENST00000351808 H3BQ15 152 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 RPS12P25398 132 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 HRH1P35367 487 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 THBS4P35443 961 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 RGS19P49795 217 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 GAGE1Q13065 139 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 MRPL2Q5T653 305 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 HSD17B11Q8NBQ5 300 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 RNF128Q8TEB7 428 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 TSEN15Q8WW01 171 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 ZNF689Q96CS4 500 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 ZNF764Q96H86 408 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 ZNF385AQ96PM9 386 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 AIF1LQ9BQI0 150 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 ACTR3CQ9C0K3 210 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 METTL8Q9H825 291 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 CAPN10Q9HC96 672 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 PPIL1Q9Y3C6 166 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 EML5Q05BV3 1969 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 PRRC2BQ5JSZ5 2229 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 A0A0A6YYD5 115 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 A0A1W2PR48 441 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 C4orf47A7E2U8 309 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 AMBPP02760 352 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 MMP7P09237 267 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 PGA3P0DJD8 388 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 FCARP24071 287 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 PSMB5P28074 263 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 CCKBRP32239 447 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 UBE2KP61086 200 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 KDM8Q8N371 416 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 NPEPL1Q8NDH3 523 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 SLC17A5Q9NRA2 495 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 JTBO76095 146 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 APBB3O95704 486 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 RPL4P36578 427 aaKnown RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 ARSJQ5FYB0 599 aaPredicted RBP11.89□□□□□ -0.51
IFT88-202ENST00000351808 SLC22A25Q6T423 547 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 FJX1Q86VR8 437 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 MCHR2Q969V1 340 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 MENTQ9BUN1 341 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 ADAP2Q9NPF8 381 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 RXFP3Q9NSD7 469 aa11.89□□□□□ -0.51
IFT88-202ENST00000351808 PRH1P02810 166 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 NGFRP08138 427 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 PI3P19957 117 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 KLK2P20151 261 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 FCGR2CP31995 323 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 RPS27P42677 84 aaKnown RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 SNRPD1P62314 119 aaKnown RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 FAM3AP98173 230 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 SPEM2Q0P670 501 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 TMEM35AQ53FP2 167 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 GLYATL3Q5SZD4 288 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 TRAPPC6BQ86SZ2 158 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 RASD2Q96D21 266 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 COMMD4Q9H0A8 199 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 CGGBP1Q9UFW8 167 aaPredicted RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 H0YL77 283 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 DOK2O60496 412 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 OR4A8P0C604 315 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 METTL15P1P0C7V9 234 aa11.88□□□□□ -0.51
IFT88-202ENST00000351808 CSNK2A2P19784 350 aaPredicted RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 MDKP21741 143 aaPredicted RBP11.88□□□□□ -0.51
IFT88-202ENST00000351808 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms