RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR1M1Q8NGA1 313 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 HLA-CQ95604 372 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 RASL10BQ96S79 203 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 FBXL2Q9UKC9 423 aa19.67■□□□□ 0.74
UPF3A-201ENST00000351487 A0A1W2PPL8 197 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 TMEM235A6NFC5 223 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 M0QYG6 137 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 BPNT1O95861 308 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 RRASP10301 218 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 CLDN6P56747 220 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 QRFPP83859 136 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF260Q3ZCT1 412 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 MRPL14Q6P1L8 145 aaKnown RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 OR52N4Q8NGI2 321 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 OR1J2Q8NGS2 313 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 SLC25A43Q8WUT9 341 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 ZMAT3Q9HA38 289 aaKnown RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF878C9JN71 531 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 CRYZL1O95825 349 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 OR4E1P0C645 316 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 INPP5JQ15735 1006 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 PAQR4Q8N4S7 273 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 FADS6Q8N9I5 356 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 ACBD4Q8NC06 268 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 EDAQ92838 391 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 MYEF2Q9P2K5 600 aaKnown RBP19.66■□□□□ 0.74
UPF3A-201ENST00000351487 KIF25Q9UIL4 384 aa19.66■□□□□ 0.74
UPF3A-201ENST00000351487 VCANP13611 3396 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 WIPF3A6NGB9 483 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 S100A11P31949 105 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 DHPSP49366 369 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-201ENST00000351487 OC90Q02509 493 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-201ENST00000351487 UNC119Q13432 240 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 SLC25A47Q6Q0C1 308 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 ZNF584Q8IVC4 421 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 OR6X1Q8NH79 312 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 DEFB126Q9BYW3 111 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 TMEM185BQ9H7F4 350 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 SLC2A8Q9NY64 477 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 FBLN5Q9UBX5 448 aa19.65■□□□□ 0.74
UPF3A-201ENST00000351487 A0A1B0GTI1 187 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 ARPC5O15511 151 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 ADH6P28332 368 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 GNALP38405 381 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 MEF2DQ14814 521 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 FAM46BQ96A09 425 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 OR5B2Q96R09 309 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 B3GNT4Q9C0J1 378 aa19.64■□□□□ 0.74
UPF3A-201ENST00000351487 SPEGQ15772 3267 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 A0A1W2PNR3 127 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 MEN1O00255 615 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 SCGNO76038 276 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 PDGFAP04085 211 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 MPZP25189 248 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 HLXQ14774 488 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-201ENST00000351487 ATPAF1Q5TC12 328 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-201ENST00000351487 B3GNTL1Q67FW5 361 aaPredicted RBP19.64■□□□□ 0.73
UPF3A-201ENST00000351487 BPIFB2Q8N4F0 458 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 WDSUB1Q8N9V3 476 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 OR5D14Q8NGL3 314 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 ELP5Q8TE02 316 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 OXGR1Q96P68 337 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 NUDT16L1Q9BRJ7 211 aaKnown RBP19.64■□□□□ 0.73
UPF3A-201ENST00000351487 PRO3102Q9H379 93 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 SLC5A6Q9Y289 635 aa19.64■□□□□ 0.73
UPF3A-201ENST00000351487 ZNF814B7Z6K7 855 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 RAB3AP20336 220 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 FKBP2P26885 142 aaKnown RBP19.63■□□□□ 0.73
UPF3A-201ENST00000351487 EIF1P41567 113 aaKnown RBP19.63■□□□□ 0.73
UPF3A-201ENST00000351487 HIST3H3Q16695 136 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 CHMP1BQ7LBR1 199 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 OR13C8Q8NGS7 320 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 PCNPQ8WW12 178 aaKnown RBP19.63■□□□□ 0.73
UPF3A-201ENST00000351487 C17orf50Q8WW18 174 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 NAT6Q93015 286 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 POLR1DQ9Y2S0 133 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 HDGFL3Q9Y3E1 203 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 MYO15AQ9UKN7 3530 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 LOC102725191A0A1B0GVB3 256 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 FOXK1P85037 733 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 ZMYND11Q15326 602 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 KCNMB1Q16558 191 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 C11orf88Q6PI97 169 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 TMUB2Q71RG4 321 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 GPAT4Q86UL3 456 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 C12orf45Q8N5I9 185 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-201ENST00000351487 OR2AJ1Q8NGZ0 328 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 PTGES2Q9H7Z7 377 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 WDR54Q9H977 334 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 SIT1Q9Y3P8 196 aa19.63■□□□□ 0.73
UPF3A-201ENST00000351487 CHCHD2Q9Y6H1 151 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-201ENST00000351487 EML6Q6ZMW3 1958 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 B3GALNT1O75752 331 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 ERCC1P07992 297 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-201ENST00000351487 VSIG8P0DPA2 414 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 GSK3AP49840 483 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 GMFBP60983 142 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 MFAP5Q13361 173 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 HYAL4Q2M3T9 481 aa19.62■□□□□ 0.73
UPF3A-201ENST00000351487 FJX1Q86VR8 437 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms