RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 AKR7A3O95154 331 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 CSTAP01040 98 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PGAM2P15259 253 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 GLB1P16278 677 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 IGFBP3P17936 291 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 AQP2P41181 271 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 EIF1P41567 113 aaKnown RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 RAB38P57729 211 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 IGSF11Q5DX21 431 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 TEX30Q5JUR7 227 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 C1orf100Q5SVJ3 147 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 LYSMD4Q5XG99 296 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 CA13Q8N1Q1 262 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PAQR4Q8N4S7 273 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 OR52R1Q8NGF1 315 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ADAMTS17Q8TE56 1095 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 AQP3Q92482 292 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ELF4Q99607 663 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 MAP3K3Q99759 626 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 CST11Q9H112 138 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 RHOFQ9HBH0 211 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ACKR4Q9NPB9 350 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 CSAG2Q9Y5P2 127 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 KPTNQ9Y664 436 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 GON4LQ3T8J9 2241 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 KNL1Q8NG31 2342 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF705EA8MWA4 302 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 MT-ND4LP03901 98 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 CT62P0C5K7 136 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PET100P0DJ07 73 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ABCD3P28288 659 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 AKR1C2P52895 323 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PSG6Q00889 435 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ID2Q02363 134 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 AKR1C1Q04828 323 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 MST1LQ2TV78 715 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 EIF2S3LQ2VIR3 472 aaKnown RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 GFOD2Q3B7J2 385 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 TMEM244Q5VVB8 128 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 KCTD18Q6PI47 426 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF704Q6ZNC4 412 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 MAMDC2Q7Z304 686 aaPredicted RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ZNF679Q8IYX0 411 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 SLC25A45Q8N413 288 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 BOLLQ8N9W6 283 aaKnown RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 C2CD4CQ8TF44 421 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 AQP10Q96PS8 301 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 OR5B2Q96R09 309 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 ADAT1Q9BUB4 502 aaKnown RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 SYT4Q9H2B2 425 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 PDE7BQ9NP56 450 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 LRIT1Q9P2V4 623 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 KLK13Q9UKR3 277 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 RAB22AQ9UL26 194 aa14.22□□□□□ -0.13
HMGA1-202ENST00000347617 MRPS2Q9Y399 296 aaKnown RBP14.22□□□□□ -0.13
HMGA1-202ENST00000347617 A0A087WV48 116 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 LOC390937A0A1W2PQ73 354 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 FITM1A5D6W6 292 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 FAM171A2A8MVW0 826 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 RNASEK-C17orf49H0YIS7 233 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 STK17BO94768 372 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 PNLIPP16233 465 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 SNRPEP62304 92 aaKnown RBP14.21□□□□□ -0.13
HMGA1-202ENST00000347617 ROM1Q03395 351 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 BIKQ13323 160 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 PRSS54Q6PEW0 395 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 PLXDC1Q8IUK5 500 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 OR51A4Q8NGJ6 313 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 NUDT9Q9BW91 350 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 ADAM19Q9H013 955 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 SRA1Q9HD15 236 aaKnown RBP14.21□□□□□ -0.13
HMGA1-202ENST00000347617 Q9N2J8 555 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 RAB18Q9NP72 206 aa14.21□□□□□ -0.13
HMGA1-202ENST00000347617 FARSAQ9Y285 508 aaKnown RBP14.21□□□□□ -0.13
HMGA1-202ENST00000347617 SPAG17Q6Q759 2223 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 IGKV1D-42A0A075B6H8 117 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 CPED1A4D0V7 1026 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 C5orf51A6NDU8 294 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 EFSO43281 561 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 OR10H2O60403 315 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 FBXO24O75426 580 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 NSA2O95478 260 aaKnown RBP14.2□□□□□ -0.14
HMGA1-202ENST00000347617 CD5P06127 495 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 ASAH2BP0C7U1 165 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 GIMD1P0DJR0 217 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 ZNF28P17035 718 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 RCC1P18754 421 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-202ENST00000347617 SNRPNP63162 240 aaKnown RBP14.2□□□□□ -0.14
HMGA1-202ENST00000347617 SQSTM1Q13501 440 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 COL9A2Q14055 689 aaPredicted RBP14.2□□□□□ -0.14
HMGA1-202ENST00000347617 ACTBL2Q562R1 376 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 FAM76BQ5HYJ3 339 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 SLC18B1Q6NT16 456 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 MED25Q71SY5 747 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 DPY19L4Q7Z388 723 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 COMMD1Q8N668 190 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 SCGB3A2Q96PL1 93 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 DUSP23Q9BVJ7 150 aa14.2□□□□□ -0.14
HMGA1-202ENST00000347617 ELOVL3Q9HB03 270 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms