RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 THEM4Q5T1C6 240 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 KLHL24Q6TFL4 600 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 NOXO1Q8NFA2 376 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 OR52N4Q8NGI2 321 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 GDF2Q9UK05 429 aaPredicted RBP17.2■□□□□ 0.34
COL9A3-201ENST00000343916 M0QYG6 137 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 MASP2O00187 686 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 LDLRAD4O15165 306 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 CHMP1BQ7LBR1 199 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 GABRG1Q8N1C3 465 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 SPICQ8N5J4 248 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 OR6N1Q8NGY5 312 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 EDAQ92838 391 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 FAM46BQ96A09 425 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 RHBDD3Q9Y3P4 386 aa17.2■□□□□ 0.34
COL9A3-201ENST00000343916 ARPC4-TTLL3A0A0A6YYG9 625 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 MEGF11A6BM72 1044 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 TMEM235A6NFC5 223 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 SNRPGP15A8MWD9 76 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 SYT7O43581 403 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 IGHG1P01857 330 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 CD37P11049 281 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 GABRA1P14867 456 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 PRKXP51817 358 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 PMPCAQ10713 525 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 ZNF813Q6ZN06 617 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 LYPD6Q86Y78 171 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 GALNT16Q8N428 558 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 SOX7Q9BT81 388 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 LOC390937A0A1W2PQ73 354 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 G3V3Y1 287 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 LPLP06858 475 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 MUC20Q8N307 709 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-201ENST00000343916 OR1J2Q8NGS2 313 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 CMBLQ96DG6 245 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 TINAGL1Q9GZM7 467 aaPredicted RBP17.19■□□□□ 0.34
COL9A3-201ENST00000343916 ASH2LQ9UBL3 628 aa17.19■□□□□ 0.34
COL9A3-201ENST00000343916 M0R233 179 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 RER1O15258 196 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 UMODP07911 640 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 FGF5P12034 268 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 H2BFSP57053 126 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 ACTBP60709 375 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 ACTG1P63261 375 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 IKZF1Q13422 519 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 C1orf100Q5SVJ3 147 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 RNF144BQ7Z419 303 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 OR51E1Q8TCB6 317 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 MR1Q95460 341 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 C1QTNF6Q9BXI9 259 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 EXO5Q9H790 373 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 PTRH2Q9Y3E5 179 aaKnown RBP17.18■□□□□ 0.34
COL9A3-201ENST00000343916 ZDBF2Q9HCK1 2354 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 ZNF43P17038 809 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 RAB14P61106 215 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 TOMM20Q15388 145 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 B3GNTL1Q67FW5 361 aaPredicted RBP17.18■□□□□ 0.34
COL9A3-201ENST00000343916 OR13C9Q8NGT0 318 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 SPACA5Q96QH8 159 aa17.18■□□□□ 0.34
COL9A3-201ENST00000343916 WIPF3A6NGB9 483 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 C19orf67A6NJJ6 358 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 D6RAR5 112 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 RAB3DO95716 219 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 GIPP09681 153 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-201ENST00000343916 BDKRB2P30411 391 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 CLDN6P56747 220 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 NKAIN3Q8N8D7 197 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 FADS6Q8N9I5 356 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 OR4S1Q8NGB4 309 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 GNRHR2Q96P88 292 aa17.17■□□□□ 0.34
COL9A3-201ENST00000343916 GPN3Q9UHW5 284 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-201ENST00000343916 TNRC6BQ9UPQ9 1833 aaKnown RBP17.17■□□□□ 0.34
COL9A3-201ENST00000343916 IGHV1-45A0A0A0MS14 117 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 SULT2B1O00204 365 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 QDPRP09417 244 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 RRASP10301 218 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 HSD11B1P28845 292 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 COMMD2Q86X83 199 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 PAQR4Q8N4S7 273 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-201ENST00000343916 GALNT11Q8NCW6 608 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 OR2AJ1Q8NGZ0 328 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 KLK13Q9UKR3 277 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 PRELID1Q9Y255 219 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 FARSAQ9Y285 508 aaKnown RBP17.16■□□□□ 0.34
COL9A3-201ENST00000343916 MAB21L2Q9Y586 359 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 UBE2QL1A1L167 161 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 OR2M5A3KFT3 312 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 OR2A4O95047 310 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 CSN2P05814 226 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 TAS2R19P59542 299 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 GPR85P60893 370 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 UNC119Q13432 240 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 C4orf46Q504U0 113 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 ELMOD3Q96FG2 381 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 OXGR1Q96P68 337 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 OR2A7Q96R45 310 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 TMEM138Q9NPI0 162 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 ZNF319Q9P2F9 582 aa17.16■□□□□ 0.34
COL9A3-201ENST00000343916 TP53I11O14683 189 aa17.15■□□□□ 0.34
COL9A3-201ENST00000343916 KLF7O75840 302 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms