RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 NRSN2Q9GZP1 204 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 FANCFQ9NPI8 374 aa20.02■□□□□ 0.79
TRIM28-202ENST00000341753 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.01■□□□□ 0.79
TRIM28-202ENST00000341753 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.01■□□□□ 0.79
TRIM28-202ENST00000341753 B4DGG1 531 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 H0YIZ8 118 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 EIF1AYO14602 144 aaKnown RBP20.01■□□□□ 0.79
TRIM28-202ENST00000341753 EFSO43281 561 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 TNFP01375 233 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 IL2RAP01589 272 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 GLYATL2Q8WU03 294 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 CNTD2Q9H8S5 307 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 FBRSQ9HAH7 460 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 MEX3AA1L020 520 aaKnown RBP20.01■□□□□ 0.79
TRIM28-202ENST00000341753 RAB27BO00194 218 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 P2RY10O00398 339 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 CLPSP04118 112 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 CXCR1P25024 350 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 ZNF260Q3ZCT1 412 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 OR1M1Q8NGA1 313 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 OR2I1PQ8NGU4 316 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 AQP3Q92482 292 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 RNF126Q9BV68 326 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 UQCC1Q9NVA1 299 aa20.01■□□□□ 0.79
TRIM28-202ENST00000341753 TNFRSF10CO14798 259 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 CD79AP11912 226 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 PI3P19957 117 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 RORAP35398 523 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 DCDP81605 110 aaKnown RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 RBM39Q14498 530 aaKnown RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 MICBQ29980 383 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 OOSP2Q86WS3 158 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 ASB17Q8WXJ9 295 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 THRSPQ92748 146 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 TWSG1Q9GZX9 223 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 CYTL1Q9NRR1 136 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 ZFP57Q9NU63 452 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 COA3Q9Y2R0 106 aaPredicted RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 AGPAT2O15120 278 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 ADAP1O75689 374 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 BGLAPP02818 100 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 DRD1P21728 446 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 ZNF117Q03924 483 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 FUT7Q11130 342 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 RNF141Q8WVD5 230 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 HHLA2Q9UM44 414 aa20■□□□□ 0.79
TRIM28-202ENST00000341753 MRPS33Q9Y291 106 aaKnown RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 CARHSP1Q9Y2V2 147 aaKnown RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 TMEM184BQ9Y519 407 aaPredicted RBP20■□□□□ 0.79
TRIM28-202ENST00000341753 IGLV1-36A0A0B4J1U3 117 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 ICOSLGO75144 302 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 SNAPINO95295 136 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 CBR1P16152 277 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 HLA-GP17693 338 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 SLC9A3R2Q15599 337 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 GFOD2Q3B7J2 385 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 AVPI1Q5T686 147 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 KCTD18Q6PI47 426 aaPredicted RBP19.99■□□□□ 0.79
TRIM28-202ENST00000341753 ETV3LQ6ZN32 361 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 SFT2D1Q8WV19 159 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 MMABQ96EY8 250 aaPredicted RBP19.99■□□□□ 0.79
TRIM28-202ENST00000341753 GAL3ST4Q96RP7 486 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 PNO1Q9NRX1 252 aaKnown RBP19.99■□□□□ 0.79
TRIM28-202ENST00000341753 OR5K4A6NMS3 321 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 C17orf105B2RV13 164 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 PRSS44E7EML9 344 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 CLDN4O14493 209 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 ARRB1P49407 418 aaPredicted RBP19.99■□□□□ 0.79
TRIM28-202ENST00000341753 PPM1FP49593 454 aaPredicted RBP19.99■□□□□ 0.79
TRIM28-202ENST00000341753 HHEXQ03014 270 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 UNC119Q13432 240 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 MST1LQ2TV78 715 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 ARHGEF39Q8N4T4 335 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 GPBAR1Q8TDU6 330 aa19.99■□□□□ 0.79
TRIM28-202ENST00000341753 TEX13DA0A0J9YY54 714 aaPredicted RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 TTLL8A6PVC2 850 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 HSPB2A8KAH6 182 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 F8VVB4 439 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 F8VWA3 439 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 EIF3GO75821 320 aaKnown RBP eCLIP19.98■□□□□ 0.793e-6■■□□□ 12.5
TRIM28-202ENST00000341753 IFNA6P05013 189 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 THEGLP0DJG4 465 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 MUC1P15941 1255 aaPredicted RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 GNALP38405 381 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 AKR1C3P42330 323 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 CCINQ13939 588 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 HSPB2Q16082 182 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 FGGYQ96C11 551 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 OR8D2Q9GZM6 311 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 SLC2A8Q9NY64 477 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 DHCR7Q9UBM7 475 aaKnown RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 RPL27P61353 136 aaKnown RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 MRPS21P82921 87 aaKnown RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 ROM1Q03395 351 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 SWI5Q1ZZU3 235 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 C10orf91Q5T1B1 145 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 PTCRAQ6ISU1 281 aaPredicted RBP19.98■□□□□ 0.79
TRIM28-202ENST00000341753 ZNF585AQ6P3V2 769 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 SLC29A4Q7RTT9 530 aa19.98■□□□□ 0.79
TRIM28-202ENST00000341753 RNF144BQ7Z419 303 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms