RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 TMED4Q7Z7H5 227 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 ZNF584Q8IVC4 421 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 BPIFB2Q8N4F0 458 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 FGGYQ96C11 551 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 WDR77Q9BQA1 342 aaPredicted RBP12.96□□□□□ -0.33
TDP2-201ENST00000341060 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 MRPL13Q9BYD1 178 aaKnown RBP12.96□□□□□ -0.33
TDP2-201ENST00000341060 B3GNT4Q9C0J1 378 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 PPP4R1LQ9P1A2 415 aa12.96□□□□□ -0.33
TDP2-201ENST00000341060 CPED1A4D0V7 1026 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 RFPL4AA6NLU0 287 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 RFPL4AL1F8VTS6 287 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 TIAF1O95411 115 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 DCNP07585 359 aaKnown RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 MSX1P28360 303 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 ACY1Q03154 408 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 MEF2DQ14814 521 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 TMEM65Q6PI78 240 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 KLHL24Q6TFL4 600 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 ALKAL2Q6UX46 152 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 OR10S1Q8NGN2 331 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 OR13C8Q8NGS7 320 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 FRYLO94915 3013 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 IGLV3-32A0A0A0MS00 114 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 MFSD2BA6NFX1 497 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 SYT7O43581 403 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 BPNT1O95861 308 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 ZNF28P17035 718 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 LAP3P28838 519 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 GNALP38405 381 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 SORDQ00796 357 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 MYBPHQ13203 477 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 UNC119Q13432 240 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 GK2Q14410 553 aaPredicted RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 THEM4Q5T1C6 240 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 RGS7BPQ6MZT1 257 aaPredicted RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 SLC22A24Q8N4F4 322 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 OR52N4Q8NGI2 321 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 OR5L2Q8NGL0 311 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 ATXN7L1Q9ULK2 861 aaPredicted RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 FARSAQ9Y285 508 aaKnown RBP12.95□□□□□ -0.34
TDP2-201ENST00000341060 WDR87Q6ZQQ6 2873 aa12.95□□□□□ -0.34
TDP2-201ENST00000341060 SCO1O75880 301 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 CD8AP01732 235 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 PTGDSP41222 190 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 EIF1AXP47813 144 aaKnown RBP12.94□□□□□ -0.34
TDP2-201ENST00000341060 CLDN6P56747 220 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 QRFPP83859 136 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 DHRS2Q13268 280 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 SHBQ15464 509 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 ZNF529Q6P280 563 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 ADPRHL1Q8NDY3 354 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR1M1Q8NGA1 313 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR4S1Q8NGB4 309 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 POC1BQ8TC44 478 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 NKD1Q969G9 470 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 ADAT3Q96EY9 351 aaPredicted RBP12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR6C1Q96RD1 312 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 PRRT1Q99946 306 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 SDHAF2Q9NX18 166 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 WIF1Q9Y5W5 379 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 TRAV14DV4A0A0A6YYC5 116 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 A0A1B0GTI1 187 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR14I1A6ND48 311 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 DISC1C4P0D8 188 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 SCRG1O75711 98 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 PGA4P0DJD7 388 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 PGA3P0DJD8 388 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 MPZP25189 248 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 MPGP29372 298 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 ZMYND11Q15326 602 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 SCGB2B2Q4G0G5 96 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 WDR45BQ5MNZ6 344 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 LPCAT3Q6P1A2 487 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 C3orf33Q6P1S2 294 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 FJX1Q86VR8 437 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 UEVLDQ8IX04 471 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 STEAP2Q8NFT2 490 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR5M8Q8NGP6 311 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 OR6K3Q8NGY3 331 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 FAM46BQ96A09 425 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 MFFQ9GZY8 342 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 MYOTQ9UBF9 498 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 B3GALT1Q9Y5Z6 326 aa12.94□□□□□ -0.34
TDP2-201ENST00000341060 NCOA6Q14686 2063 aaPredicted RBP12.93□□□□□ -0.34
TDP2-201ENST00000341060 SCGNO76038 276 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 VSIG8P0DPA2 414 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms