RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ATG16L1Q676U5 607 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 KLHL7Q8IXQ5 586 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 FAM216BQ8N7L0 139 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 OR8G5Q8NG78 346 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 OIT3Q8WWZ8 545 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 CDRT15Q96T59 188 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 ECSITQ9BQ95 431 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-201ENST00000340660 NSMCE4AQ9NXX6 385 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 RNF7Q9UBF6 113 aa8.58□□□□□ -1.04
ATXN3-201ENST00000340660 IGHV3OR15-7A0A075B7D8 119 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 AK1P00568 194 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 HLA-DPB1P04440 258 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 AMY1AP04745 511 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 RPS17P08708 135 aaKnown RBP8.57□□□□□ -1.04
ATXN3-201ENST00000340660 CBLP22681 906 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 ARRB2P32121 409 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 GGT2P36268 569 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 INTS11Q5TA45 600 aaKnown RBP8.57□□□□□ -1.04
ATXN3-201ENST00000340660 SYCE1Q8N0S2 351 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 OR7A2PQ8NGA2 310 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 OR56A1Q8NGH5 318 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 ERGIC1Q969X5 290 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 PPCDCQ96CD2 204 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 RNF183Q96D59 192 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF583Q96ND8 569 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 CCL13Q99616 98 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 WNT5BQ9H1J7 359 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 SH3BP4Q9P0V3 963 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 STARD10Q9Y365 291 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 TEX264Q9Y6I9 313 aa8.57□□□□□ -1.04
ATXN3-201ENST00000340660 AKAP10O43572 662 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 TBX19O60806 448 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 SAP30O75446 220 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ABHD16AO95870 558 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ARSBP15848 533 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 AZGP1P25311 298 aaKnown RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 DYNLT3P51808 116 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 GUCY2DQ02846 1103 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 FUT5Q11128 374 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 RNF151Q2KHN1 245 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 OR2T2Q6IF00 324 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF770Q6IQ21 691 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 CNGA4Q8IV77 575 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 MKXQ8IYA7 352 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 CADM2Q8N3J6 435 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ADPRHL1Q8NDY3 354 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 BCAS4Q8TDM0 211 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ZNF483Q8TF39 744 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 AENQ8WTP8 325 aaKnown RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 H1FXQ92522 213 aaKnown RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 TAAR8Q969N4 342 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 TEX37Q96LM6 180 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 NOL4LQ96MY1 436 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 MEAF6Q9HAF1 191 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 ATP6V1HQ9UI12 483 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 WDR45Q9Y484 360 aa8.56□□□□□ -1.04
ATXN3-201ENST00000340660 SIRT4Q9Y6E7 314 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-201ENST00000340660 A0A1B0GWJ7 208 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 FAM90A22PA8MWA6 464 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 STX16-NPEPL1H3BU86 382 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 STX16O14662 325 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 SERPINI2O75830 405 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 SELLP14151 372 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 GSK3BP49841 420 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 BIDP55957 195 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 LGALS4P56470 323 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 SUMO1P63165 101 aaKnown RBP8.55□□□□□ -1.04
ATXN3-201ENST00000340660 ILF2Q12905 390 aaKnown RBP8.55□□□□□ -1.04
ATXN3-201ENST00000340660 SEC23BQ15437 767 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 SSX2Q16385 188 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 OR5AK3PQ8NH89 298 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 EME1Q96AY2 570 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 DUS3LQ96G46 650 aaKnown RBP8.55□□□□□ -1.04
ATXN3-201ENST00000340660 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-201ENST00000340660 REEP4Q9H6H4 257 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 CCNB1IP1Q9NPC3 277 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 PFDN2Q9UHV9 154 aa8.55□□□□□ -1.04
ATXN3-201ENST00000340660 A0A096LPI6 279 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 H0YAE9 185 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 CCRL2O00421 344 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 RHBDL1O75783 438 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 FGGP02679 453 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 SPARCP09486 303 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 GKN3PP0CG01 181 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 PGA5P0DJD9 388 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 UQCRBP14927 111 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 COX7A1P24310 79 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 HMGA2P52926 109 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 PDIA2Q13087 525 aaKnown RBP8.54□□□□□ -1.04
ATXN3-201ENST00000340660 NAB1Q13506 487 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 BLMHQ13867 455 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 FASTKD3Q14CZ7 662 aaKnown RBP8.54□□□□□ -1.04
ATXN3-201ENST00000340660 LSM12Q3MHD2 195 aaKnown RBP8.54□□□□□ -1.04
ATXN3-201ENST00000340660 WDR38Q5JTN6 314 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 TEX36Q5VZQ5 186 aa8.54□□□□□ -1.04
ATXN3-201ENST00000340660 WBP2NLQ6ICG8 309 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms