RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM229BQ8NBD8 167 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 MARC2Q969Z3 335 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
CPSF7-201ENST00000340437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 A0A1W2PP11 408 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF208O43345 1280 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TXNDC12O95881 172 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ABOP16442 354 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 BDKRB2P30411 391 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TLE3Q04726 772 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 SNTB1Q13884 538 aaKnown RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TOMM20Q15388 145 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 SGCBQ16585 318 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 KIAA0895LQ68EN5 471 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 WDFY1Q8IWB7 410 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 OR5M8Q8NGP6 311 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ADAMTS18Q8TE60 1221 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 PHB2Q99623 299 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ST6GALNAC5Q9BVH7 336 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 NKX6-2Q9C056 277 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ADAM19Q9H013 955 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 S1PR5Q9H228 398 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF768Q9H5H4 540 aaKnown RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 LDAHQ9H6V9 325 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 MLXQ9UH92 298 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 GDF2Q9UK05 429 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 CSAG2Q9Y5P2 127 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 A0A0D9SG52 128 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 SDCBPO00560 298 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 NAGAP17050 411 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 CNR1P21554 472 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 SERPINF1P36955 418 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 S100A10P60903 97 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 OR51E1Q8TCB6 317 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ELP5Q8TE02 316 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 IGLV1-36A0A0B4J1U3 117 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ADAP1O75689 374 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 FARS2O95363 451 aaKnown RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 GIMD1P0DJR0 217 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 SLC6A8P48029 635 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 RSPO4Q2I0M5 234 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 JMJD6Q6NYC1 403 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 TMEM17Q86X19 198 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 CBLN2Q8IUK8 224 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 OR10R2Q8NGX6 335 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 ASB12Q8WXK4 309 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 C8orf44Q96CB5 159 aa12.87□□□□□ -0.35
CPSF7-201ENST00000340437 A8MVM7 634 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 F8W036 122 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 PLPP3O14495 311 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 POLR2HP52434 150 aaKnown RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 BIDP55957 195 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 FGL1Q08830 312 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 PTCRAQ6ISU1 281 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ADAT3Q96EY9 351 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 PARP12Q9H0J9 701 aaKnown RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 HRH4Q9H3N8 390 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 METTL8Q9H825 291 aaKnown RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 LANCL2Q9NS86 450 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 SUSD2Q9UGT4 822 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 R4GMQ9 66 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 AQP8O94778 261 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 HCKP08631 526 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF20P17024 532 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 DRD1P21728 446 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 EMP2P54851 167 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 EBPQ15125 230 aaKnown RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ARHGEF39Q8N4T4 335 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF721Q8TF20 911 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ZNF578Q96N58 590 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 FBRSQ9HAH7 460 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 HPF1Q9NWY4 346 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 VSX1Q9NZR4 365 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 DDAH2O95865 285 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 IL32P24001 234 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 EFNA3P52797 238 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-201ENST00000340437 GUCA2BQ16661 112 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ZFP82Q8N141 532 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 SLC26A10Q8NG04 563 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 SLC25A32Q9H2D1 315 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 GAREM1Q9H706 876 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 ACKR4Q9NPB9 350 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 RASL12Q9NYN1 266 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 CTSFQ9UBX1 484 aa12.86□□□□□ -0.35
CPSF7-201ENST00000340437 C9orf170A2RU37 121 aa12.85□□□□□ -0.35
CPSF7-201ENST00000340437 FRG2CA6NGY1 282 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms