RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RHOFQ9HBH0 211 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 OR52A4PA6NMU1 304 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 M0QZ24 198 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 AKR7A2O43488 359 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 DUS4LO95620 317 aaKnown RBP11.77□□□□□ -0.52
USP47-202ENST00000339865 PI3P19957 117 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 RAB32Q13637 225 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 APCDD1Q8J025 514 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.52
USP47-202ENST00000339865 TIMD4Q96H15 378 aa11.77□□□□□ -0.52
USP47-202ENST00000339865 DNPH1O43598 174 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 CYBAP13498 195 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 OSTM1Q86WC4 334 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 OR5M11Q96RB7 305 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 FAM166BA8MTA8 275 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 FGF4P08620 206 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 GCAP28676 217 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 CAMPP49913 170 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 BTG1P62324 171 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 GABRG1Q8N1C3 465 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 PPP1R1CQ8WVI7 109 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
USP47-202ENST00000339865 PLEKHA2Q9HB19 425 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 PSORS1C1Q9UIG5 152 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 A0A0J9YY10 115 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 C5AR1P21730 350 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 PRSS12P56730 875 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 PIGPP57054 158 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 C6orf201Q7Z4U5 140 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 TTC9Q92623 222 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 SPAG8Q99932 426 aaPredicted RBP11.77□□□□□ -0.53
USP47-202ENST00000339865 PECRQ9BY49 303 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 CHST6Q9GZX3 395 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 MOKQ9UQ07 419 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 FUCA1P04066 466 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 CXCL12P48061 93 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 ZNF385BQ569K4 471 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 DCAF12Q5T6F0 453 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 HSD3B7Q9H2F3 369 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 ZNF385DQ9H6B1 395 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 IGSF5Q9NSI5 407 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 OR51B4Q9Y5P0 310 aa11.77□□□□□ -0.53
USP47-202ENST00000339865 H3BP45 60 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 RGS13O14921 159 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 SEMA4FO95754 770 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 CPEP16870 476 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 HRH1P35367 487 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 OPRM1P35372 400 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 FAAP20Q6NZ36 180 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 PLPP6Q8IY26 295 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 TNFRSF13CQ96RJ3 184 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 OR2D2Q9H210 308 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 NUMBLQ9Y6R0 609 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 RNF113BQ8IZP6 322 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 RTN4IP1Q8WWV3 396 aaPredicted RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 SLC35A4Q96G79 324 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 C3orf30Q96M34 536 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 SLAMF8Q9P0V8 285 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 WRAP73Q9P2S5 460 aaPredicted RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 MMP24Q9Y5R2 645 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 PM20D1Q6GTS8 502 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 VASH2Q86V25 355 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 DLL4Q9NR61 685 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 SLC22A13Q9Y226 551 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 A6NDN8 102 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 OR4D10Q8NGI6 311 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 NDUFB11Q9NX14 153 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 GPR45Q9Y5Y3 372 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 B4GALT3O60512 393 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 POLR2IP36954 125 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 FAM3AP98173 230 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 FAM24BQ8N5W8 94 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 DLX1P56177 255 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 KCNJ10P78508 379 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 MOB3AQ96BX8 217 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 RNF2Q99496 336 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 PELI2Q9HAT8 420 aa11.76□□□□□ -0.53
USP47-202ENST00000339865 RIMS1Q86UR5 1692 aaKnown RBP11.76□□□□□ -0.53
USP47-202ENST00000339865 ZNF716A6NP11 495 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 IGHV3-9P01782 118 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 BMP5P22003 454 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 RGRP47804 291 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 ZNF480Q8WV37 535 aa11.75□□□□□ -0.53
USP47-202ENST00000339865 KLRG1Q96E93 195 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms