RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 ELOVL3Q9HB03 270 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 SCN3BQ9NY72 215 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 CNOT2Q9NZN8 540 aaKnown RBP12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 PSORS1C1Q9UIG5 152 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 N6AMT1Q9Y5N5 214 aa12.15□□□□□ -0.46
APOBEC3B-202ENST00000335760 CADP27708 2225 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 HS3ST1O14792 307 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 GPRIN2O60269 458 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ICMTO60725 284 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF254O75437 659 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 LCATP04180 440 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 KRT8P05787 483 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ANXA2P07355 339 aaKnown RBP12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 PIPP12273 146 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 DCKP27707 260 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 THBS4P35443 961 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 RGS6P49758 472 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 RIDAP52758 137 aaKnown RBP12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ST3GAL4Q11206 333 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 MED21Q13503 144 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 DRAM2Q6UX65 266 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 UNQ6126/PRO20091Q6UXV3 157 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 AHSA2Q719I0 299 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 LHFPL3Q86UP9 236 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF786Q8N393 782 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 STX19Q8N4C7 294 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 YIPF7Q8N8F6 280 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 C1QTNF5Q9BXJ0 243 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 BCL2L14Q9BZR8 327 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 NIPAL2Q9H841 368 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 INPP5EQ9NRR6 644 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 CA10Q9NS85 328 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 TBCCD1Q9NVR7 557 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 ERVK13-1Q9NX77 482 aa12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
APOBEC3B-202ENST00000335760 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 PTGES3LE9PB15 166 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 APOC1P02654 83 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ADRA2AP08913 450 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 CCDC159P0C7I6 412 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 SLC2A1P11166 492 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 GLRXP35754 106 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 FABP6P51161 128 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF121P58317 390 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 PPP1CBP62140 327 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 RPS23P62266 143 aaKnown RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 MVKQ03426 396 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 GALEQ14376 348 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 TP53I3Q53FA7 332 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 PLEKHG7Q6ZR37 379 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 DOK1Q99704 481 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ALG8Q9BVK2 526 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF442Q9H7R0 627 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 PLEKHF2Q9H8W4 249 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 BRD7Q9NPI1 651 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 FKBP14Q9NWM8 211 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 GNG8Q9UK08 70 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 DIMT1Q9UNQ2 313 aaKnown RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 EXOSC1Q9Y3B2 195 aaKnown RBP12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 TPRKBQ9Y3C4 175 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 NBPF19A0A087WUL8 3843 aa12.13□□□□□ -0.47
APOBEC3B-202ENST00000335760 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 J3QLW9 94 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 SULT1C4O75897 302 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 RPP14O95059 124 aaKnown RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF19P17023 458 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 MYL12AP19105 171 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 DCTDP32321 178 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 ETV1P50549 477 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 PSMA6P60900 246 aaKnown RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 CDONQ4KMG0 1287 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 RBM48Q5RL73 367 aaKnown RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 RGS7BPQ6MZT1 257 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 COLCA1Q6ZS62 124 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 FAM57BQ71RH2 274 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 FAM220AQ7Z4H9 259 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 TMEM171Q8WVE6 324 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 MYDGFQ969H8 173 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 PGAM5Q96HS1 289 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 COG8Q96MW5 612 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 MYCBPQ99417 103 aaPredicted RBP12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 JAM3Q9BX67 310 aa12.12□□□□□ -0.47
APOBEC3B-202ENST00000335760 POFUT1Q9H488 388 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms