RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 TNRC6BQ9UPQ9 1833 aaKnown RBP11.91□□□□□ -0.5
RC3H2-201ENST00000335387 IGKV1D-43A0A0B4J1Z2 117 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 MPTX1A8MV57 137 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 DUX1O43812 170 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 MPZL1O95297 269 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 AMY2AP04746 511 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 GIMD1P0DJR0 217 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 SRFP11831 508 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 GLB1P16278 677 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 ZNF823P16415 610 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 CTSSP25774 331 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 PTGDSP41222 190 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 ALDH3B1P43353 468 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 MELKQ14680 651 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 ODF4Q2M2E3 257 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 VAX1Q5SQQ9 334 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 THEM4Q5T1C6 240 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 RABEPKQ7Z6M1 372 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 OR1M1Q8NGA1 313 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 MRGPRX4Q96LA9 322 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 DHCR7Q9UBM7 475 aaKnown RBP11.9□□□□□ -0.5
RC3H2-201ENST00000335387 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
RC3H2-201ENST00000335387 SRPK3Q9UPE1 567 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 TMEM269A0A1B0GVZ9 245 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 SDC3O75056 442 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 CASRP41180 1078 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 ZNF133P52736 654 aaPredicted RBP11.9□□□□□ -0.5
RC3H2-201ENST00000335387 UQCC3Q6UW78 93 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 ALKAL2Q6UX46 152 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 PCNPQ8WW12 178 aaKnown RBP11.9□□□□□ -0.5
RC3H2-201ENST00000335387 FAM46BQ96A09 425 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 PRRX2Q99811 253 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
RC3H2-201ENST00000335387 A0A1B0GW55 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 C9orf170A2RU37 121 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 CDC14CA4D256 554 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 FOXI3A8MTJ6 420 aaPredicted RBP11.9□□□□□ -0.51
RC3H2-201ENST00000335387 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 CDK2AP1O14519 115 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 RLN2P04090 185 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L2P0CJ85 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L3P0CJ86 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L4P0CJ87 422 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L5P0CJ88 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L6P0CJ89 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4L7P0CJ90 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 ZNF273Q14593 569 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 ANKRD37Q7Z713 158 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 FJX1Q86VR8 437 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 HOGA1Q86XE5 327 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 CLIP3Q96DZ5 547 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 DUX4Q9UBX2 424 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.51
RC3H2-201ENST00000335387 SSX5O60225 188 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 ERCC1P07992 297 aaPredicted RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 CHRM2P08172 466 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 FREM3P0C091 2139 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 VSIG8P0DPA2 414 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PNLIPP16233 465 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 CD34P28906 385 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 DEFB133Q30KQ1 61 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 TMEM185AQ8NFB2 350 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 EIF1AYO14602 144 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 FGF16O43320 207 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 GSTP1P09211 210 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PGA4P0DJD7 388 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PGA3P0DJD8 388 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 EIF1AXP47813 144 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 OR1D5P58170 312 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 ACTBL2Q562R1 376 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 FOXL2NBQ6ZUU3 175 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 ZNF627Q7L945 461 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PEG10Q86TG7 708 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 ZNF546Q86UE3 836 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 BEST3Q8N1M1 668 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 SLAMF6Q96DU3 332 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 NMES1Q9C002 83 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PBOV1Q9GZY1 135 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 FN3KRPQ9HA64 309 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 PNRC2Q9NPJ4 139 aaKnown RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 RPH3AQ9Y2J0 694 aaPredicted RBP11.89□□□□□ -0.51
RC3H2-201ENST00000335387 SPTBP11277 2137 aa11.89□□□□□ -0.51
RC3H2-201ENST00000335387 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 VSTM2BA6NLU5 285 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 M0QYG6 137 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 LMX1BO60663 402 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 PRKACBP22694 351 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 FKBP2P26885 142 aaKnown RBP11.88□□□□□ -0.51
RC3H2-201ENST00000335387 LAP3P28838 519 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 TAS2R31P59538 309 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 NAAAQ02083 359 aa11.88□□□□□ -0.51
RC3H2-201ENST00000335387 FMODQ06828 376 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms