RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 STACQ99469 402 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 SPOCK3Q9BQ16 436 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 CHRDL1Q9BU40 450 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 IL17BQ9UHF5 180 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM184BQ9Y519 407 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-201ENST00000334504 NUMBLQ9Y6R0 609 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 C3P01024 1663 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 MYOM1P52179 1685 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 LEUTXA8MZ59 168 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 TCF21O43680 179 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 PIAS2O75928 621 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 ETV3LQ6ZN32 361 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 GRINAQ7Z429 371 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 SCCPDHQ8NBX0 429 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 GPX8Q8TED1 209 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 SMIM12Q96EX1 92 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 BARHL1Q9BZE3 327 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 LINC00597Q9H2U6 94 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 ISG20L2Q9H9L3 353 aaKnown RBP8.95□□□□□ -0.98
COL4A6-201ENST00000334504 FAM221AA4D161 298 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 KIAA1324LA8MWY0 1029 aaPredicted RBP8.95□□□□□ -0.98
COL4A6-201ENST00000334504 RPL7P18124 248 aaKnown RBP8.95□□□□□ -0.98
COL4A6-201ENST00000334504 CD1CP29017 333 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 FAM209AQ5JX71 171 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 PLXDC2Q6UX71 529 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM179BQ7Z7N9 219 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 RHNO1Q9BSD3 238 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF835Q9Y2P0 537 aa8.95□□□□□ -0.98
COL4A6-201ENST00000334504 PRSS38A1L453 326 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ENPP1P22413 925 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 GPM6AP51674 278 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 PIGPP57054 158 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 GUCA2AQ02747 115 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 PJVKQ0ZLH3 352 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OTUD1Q5VV17 481 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF595Q8IYB9 648 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 FAM210BQ96KR6 192 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 RIMS4Q9H426 269 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 hCG_1809904A0A1W2PP81 198 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 A0A1W2PR64 198 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 A0A1W2PRV1 198 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OR5K3A6NET4 321 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 SPINK4O60575 86 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OR2J2O76002 312 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CNIH1O95406 144 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CTF1Q16619 201 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ST3GAL2Q16842 350 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 STAC2Q6ZMT1 411 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OLIG1Q8TAK6 271 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 MS4A8Q9BY19 250 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 UBE2L5PA0A1B0GUS4 154 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 GATCO43716 136 aaKnown RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 HNRNPA1P09651 372 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CTXN2P0C2S0 81 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ASCL1P50553 236 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 MMP15P51511 669 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 PRSS36Q5K4E3 855 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 PRAMEF20Q5VT98 475 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 AGBL4Q5VU57 503 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM64Q6YI46 380 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 RIMKLAQ8IXN7 391 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CALHM2Q9HA72 323 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 MIOXQ9UGB7 285 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CA3P07451 260 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 HIST1H1CP16403 213 aaKnown RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 MARCH3Q86UD3 253 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OR2A1Q8NGT9 310 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OR14A16Q8NHC5 309 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 EXTL1Q92935 676 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF814B7Z6K7 855 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 MBTPS2O43462 519 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 GYPAP02724 150 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 OPRM1P35372 400 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 RPL27P61353 136 aaKnown RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 DHRS7BQ6IAN0 325 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 FAM71E1Q6IPT2 247 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 LRP11Q86VZ4 500 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ORAI1Q96D31 301 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 SFXN1Q9H9B4 322 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 B3GAT1Q9P2W7 334 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ELOA3CA0A087WX78 387 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ACAA1P09110 424 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 IL3RAP26951 378 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 RBPJQ06330 500 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 AFMIDQ63HM1 303 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 DGAT2L6Q6ZPD8 337 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 EXD3Q8N9H8 876 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 ISG20Q96AZ6 181 aaKnown RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 SPACA5Q96QH8 159 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 LIN7CQ9NUP9 197 aaKnown RBP8.94□□□□□ -0.98
COL4A6-201ENST00000334504 LHX3Q9UBR4 397 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 NENFQ9UMX5 172 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 PIAS3Q9Y6X2 628 aa8.94□□□□□ -0.98
COL4A6-201ENST00000334504 CLDN34H7C241 214 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 M0QZK8 103 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 ABCD4O14678 606 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 HCRTR1O43613 425 aa8.93□□□□□ -0.98
COL4A6-201ENST00000334504 GGCTO75223 188 aaKnown RBP8.93□□□□□ -0.98
COL4A6-201ENST00000334504 AVPR2P30518 371 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms