RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PMS2P1A4D2B8 440 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC35E2P0CK97 266 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CD58P19256 250 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OPRK1P41145 380 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC37A1P57057 533 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACVR1Q04771 509 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM88Q6PEY1 159 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OVCH2Q7RTZ1 564 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 RBKSQ9H477 322 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC35A3Q9Y2D2 325 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MYLKQ15746 1914 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDK2AP1O14519 115 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR1F1O43749 312 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 B3GALT2O43825 422 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CSO75390 466 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM87AP0C7U9 286 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM225BP0DP42 221 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DUOXA1Q1HG43 343 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC36A1Q7Z2H8 476 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CEACAM19Q7Z692 300 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR9A1PQ8NGU1 263 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABHD6Q9BV23 337 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 AMBRA1Q9C0C7 1298 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MAGEH1Q9H213 219 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1B0GWJ7 208 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MBTPS2O43462 519 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 S1PR2O95136 353 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRLHRP49683 370 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 EIF3IQ13347 325 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 PDCD1LG2Q9BQ51 273 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC25A33Q9BSK2 321 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 RAB33BQ9H082 229 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DIRC3C9JPN6 131 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNHIT1O43257 154 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 NUDT14O95848 222 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 HIST1H1DP16402 221 aaKnown RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 GZMKP49863 264 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DLX1P56177 255 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC35A1P78382 337 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MICAQ29983 383 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 SDK2Q58EX2 2172 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 MARC1Q5VT66 337 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TFAP2EQ6VUC0 442 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 DNERQ8NFT8 737 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR9Q2Q8NGE9 314 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CDS1Q92903 461 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 TSPAN32Q96QS1 320 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 PIP5K1AQ99755 562 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 NDUFAF3Q9BU61 184 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF490Q9ULM2 529 aaPredicted RBP5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 ROBO1Q9Y6N7 1651 aa5.57□□□□□ -1.52
CDC42BPA-201ENST00000334218 CORTO00230 105 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLDN4O14493 209 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCAT2O15382 392 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C9orf153Q5TBE3 101 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MAMDC4Q6UXC1 1216 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZBED6CLQ96FA7 236 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MMP17Q9ULZ9 603 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACKR2O00590 384 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CST4P01036 141 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SFTA3P0C7M3 94 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC35E2BP0CK96 405 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 BMP4P12644 408 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF43P17038 809 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CSF2RBP32927 897 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLK1P53350 603 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCL2L1Q07817 233 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 PTPRCAPQ14761 206 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 NKAIN2Q5VXU1 208 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 EEF1DP3Q658K8 133 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 LRRTM4Q86VH4 590 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM72BQ86X60 149 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR52B6Q8NGF0 335 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C19orf43Q9BQ61 176 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C2orf88Q9BSF0 95 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 MIXL1Q9H2W2 232 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 GRHPRQ9UBQ7 328 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATRXP46100 2492 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 BCL2L11O43521 198 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 EEDO75530 441 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TNFRSF9Q07011 255 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 TCTN1Q2MV58 587 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR52W1Q6IF63 320 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR6F1Q8NGZ6 308 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR4A5Q8NH83 315 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CLSTN3Q9BQT9 956 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 B3GAT2Q9NPZ5 323 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 KNDC1Q76NI1 1749 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 C15orf62A8K5M9 175 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACP5P13686 325 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 CAPZBP47756 277 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SMN1Q16637 294 aaKnown RBP5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 SNAI3Q3KNW1 292 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OTOP2Q7RTS6 562 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 RNF175Q8N4F7 328 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR2T10Q8NGZ9 312 aa5.56□□□□□ -1.52
CDC42BPA-201ENST00000334218 ROBO4Q8WZ75 1007 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms