RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 C1QTNF5Q9BXJ0 243 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 OR51B6Q9H340 312 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 ELOVL3Q9HB03 270 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 FGF20Q9NP95 211 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-202ENST00000331450 SLCO1C1Q9NYB5 712 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 EIF3KQ9UBQ5 218 aaKnown RBP13.81□□□□□ -0.2
LRRC28-202ENST00000331450 MYRFQ9Y2G1 1151 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 GRIP1Q9Y3R0 1128 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 PCDHGB1Q9Y5G3 927 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 DSCAMO60469 2012 aa13.81□□□□□ -0.2
LRRC28-202ENST00000331450 F5H5K5 113 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF254O75437 659 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 APOBEC3AP31941 199 aaPredicted RBP13.8□□□□□ -0.2
LRRC28-202ENST00000331450 DCTDP32321 178 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 PRKXP51817 358 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 TPTEP56180 551 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
LRRC28-202ENST00000331450 PPP1CBP62140 327 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 TAF13Q15543 124 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 KLHL22Q53GT1 634 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 UNQ6126/PRO20091Q6UXV3 157 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 C20orf204Q6ZNR8 217 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 KRT77Q7Z794 578 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 DTX2Q86UW9 622 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF679Q8IYX0 411 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 OR1J1Q8NGS3 322 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 ABHD4Q8TB40 342 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 NRGNQ92686 78 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 APOBEC3DQ96AK3 386 aaPredicted RBP13.8□□□□□ -0.2
LRRC28-202ENST00000331450 MARS2Q96GW9 593 aaKnown RBP13.8□□□□□ -0.2
LRRC28-202ENST00000331450 DOK1Q99704 481 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF649Q9BS31 505 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 LIME1Q9H400 295 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 NIPAL2Q9H841 368 aa13.8□□□□□ -0.2
LRRC28-202ENST00000331450 MRM2Q9UI43 246 aaKnown RBP13.8□□□□□ -0.2
LRRC28-202ENST00000331450 H3BSA7 217 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 PSMD9O00233 223 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 DENRO43583 198 aaKnown RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 XPNPEP2O43895 674 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 SRSF10O75494 262 aaKnown RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 FADS2O95864 444 aaKnown RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 SOD3P08294 240 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 ADRA2AP08913 450 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 PIPP12273 146 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 HSD11B1P28845 292 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 TTKP33981 857 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 CX3CR1P49238 355 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 EFNB3Q15768 340 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 C6orf141Q5SZD1 244 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 RGS7BPQ6MZT1 257 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 VHLLQ6RSH7 139 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 PAMR1Q6UXH9 720 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 ACBD7Q8N6N7 88 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 MRPL24Q96A35 216 aaKnown RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 LURAP1Q96LR2 239 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 MROQ9BYG7 248 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 POFUT1Q9H488 388 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 FKBP14Q9NWM8 211 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 CNOT2Q9NZN8 540 aaKnown RBP13.79□□□□□ -0.2
LRRC28-202ENST00000331450 PSORS1C1Q9UIG5 152 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 PCDHGB5Q9Y5G0 923 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 CACNA1DQ01668 2161 aa13.79□□□□□ -0.2
LRRC28-202ENST00000331450 IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 IRGMA1A4Y4 181 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 C5orf63A6NC05 138 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 SLC1A7O00341 560 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 MAGEB4O15481 346 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 CD8AP01732 235 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 APOC1P02654 83 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 LCKP06239 509 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 OR4A8P0C604 315 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF250P15622 560 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 TUBG1P23258 451 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 SLC6A9P48067 706 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 FABP6P51161 128 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF121P58317 390 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 MST1LQ2TV78 715 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 SNAI3Q3KNW1 292 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 CDONQ4KMG0 1287 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 TMEM255AQ5JRV8 349 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 C11orf71Q6IPW1 123 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 MUC15Q8N387 334 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 GGHQ92820 318 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 CNBD2Q96M20 576 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 COG8Q96MW5 612 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 TRAF4Q9BUZ4 470 aaPredicted RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 MRPL37Q9BZE1 423 aaKnown RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 OR2J1Q9GZK6 312 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 INPP5EQ9NRR6 644 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 FAIMQ9NVQ4 179 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 ERVK13-1Q9NX77 482 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 DIMT1Q9UNQ2 313 aaKnown RBP13.78□□□□□ -0.2
LRRC28-202ENST00000331450 CMAHPQ9Y471 501 aa13.78□□□□□ -0.2
LRRC28-202ENST00000331450 TMEM129A0AVI4 362 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms