RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MRPS18BQ9Y676 258 aaKnown RBP21.84■■□□□ 1.09
SOX1-201ENST00000330949 LDLRAD4O15165 306 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 TLX1P31314 330 aaPredicted RBP21.83■■□□□ 1.09
SOX1-201ENST00000330949 RPS10P46783 165 aaKnown RBP21.83■■□□□ 1.09
SOX1-201ENST00000330949 CHAF1BQ13112 559 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 TDGQ13569 410 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 GUK1Q16774 197 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 TMEM268Q5VZI3 342 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 GKN2Q86XP6 184 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 C12orf76Q8N812 135 aaPredicted RBP21.83■■□□□ 1.09
SOX1-201ENST00000330949 BHLHE23Q8NDY6 225 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 OR2L3Q8NG85 312 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 COX14Q96I36 57 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 ASB16Q96NS5 453 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 KCNK6Q9Y257 313 aa21.83■■□□□ 1.09
SOX1-201ENST00000330949 A0A087WV62 115 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 C4orf47A7E2U8 309 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 SEC14L6B5MCN3 397 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 LINC00271P0C7V0 271 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 TBPP20226 339 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 FCRL6Q6DN72 434 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 ZNF550Q7Z398 422 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 TMEM68Q96MH6 324 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 DOK5Q9P104 306 aa21.83■■□□□ 1.08
SOX1-201ENST00000330949 BTBD17A6NE02 478 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 CXorf65A6NEN9 183 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 MLF2Q15773 248 aaPredicted RBP21.82■■□□□ 1.08
SOX1-201ENST00000330949 UBAC2Q8NBM4 344 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 OR10D4PQ8NGN7 298 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 C2orf88Q9BSF0 95 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 FLVCR1Q9Y5Y0 555 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 A0A087WUJ7 227 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 A0A087X0M5 115 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 A0A1B0GX30 115 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 RAB6AP20340 208 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 RAP1AP62834 184 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 CLINT1Q14677 625 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 GVQW1Q8N7I0 195 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 ACBD4Q8NC06 268 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 OR9K2Q8NGE7 335 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 MARCH1Q8TCQ1 289 aa21.82■■□□□ 1.08
SOX1-201ENST00000330949 GAS2L1Q99501 681 aaPredicted RBP21.82■■□□□ 1.08
SOX1-201ENST00000330949 EIF5A2Q9GZV4 153 aaKnown RBP21.82■■□□□ 1.08
SOX1-201ENST00000330949 CGGBP1Q9UFW8 167 aaPredicted RBP21.82■■□□□ 1.08
SOX1-201ENST00000330949 A0A1B0GWJ7 208 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 JTBO76095 146 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 OR2C1O95371 312 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 PRNPP04156 253 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 ZNF888P0CJ79 500 aaPredicted RBP21.81■■□□□ 1.08
SOX1-201ENST00000330949 RELQ04864 619 aaPredicted RBP21.81■■□□□ 1.08
SOX1-201ENST00000330949 ZNF260Q3ZCT1 412 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 INSM2Q96T92 566 aaPredicted RBP21.81■■□□□ 1.08
SOX1-201ENST00000330949 MEGF11A6BM72 1044 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 H7C1Q1 480 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 GPANK1O95872 356 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 RAB32Q13637 225 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 RSU1Q15404 277 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 ZNF574Q6ZN55 896 aaPredicted RBP21.81■■□□□ 1.08
SOX1-201ENST00000330949 MAMDC2Q7Z304 686 aaPredicted RBP21.81■■□□□ 1.08
SOX1-201ENST00000330949 HOGA1Q86XE5 327 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 OR51F2Q8NH61 342 aa21.81■■□□□ 1.08
SOX1-201ENST00000330949 ADAP1O75689 374 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 F10P00742 488 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 GAPDHP04406 335 aaKnown RBP21.8■■□□□ 1.08
SOX1-201ENST00000330949 TOMM34Q15785 309 aaPredicted RBP21.8■■□□□ 1.08
SOX1-201ENST00000330949 ZNF615Q8N8J6 731 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 LCN9Q8WX39 176 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 MRPS23Q9Y3D9 190 aaKnown RBP21.8■■□□□ 1.08
SOX1-201ENST00000330949 IGLON5A6NGN9 336 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 CD37P11049 281 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 RPS27P42677 84 aaKnown RBP21.8■■□□□ 1.08
SOX1-201ENST00000330949 ITPRIPL2Q3MIP1 535 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 CD300LFQ8TDQ1 290 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 TCTN2Q96GX1 697 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 INTS14Q96SY0 518 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 BCO1Q9HAY6 547 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 TAS2R4Q9NYW5 299 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 GDF2Q9UK05 429 aaPredicted RBP21.8■■□□□ 1.08
SOX1-201ENST00000330949 GTF2A1LQ9UNN4 478 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 HDGFL3Q9Y3E1 203 aa21.8■■□□□ 1.08
SOX1-201ENST00000330949 CISD3P0C7P0 127 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 FSTP19883 344 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 GRK6P43250 576 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 SLC26A5P58743 744 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 ID2Q02363 134 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 MIDNQ504T8 468 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 JAGN1Q8N5M9 183 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 C2orf50Q96LR7 162 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 YPEL4Q96NS1 127 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 KCNJ16Q9NPI9 418 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 FAM212BQ9NTI7 297 aaPredicted RBP21.79■■□□□ 1.08
SOX1-201ENST00000330949 CUTCQ9NTM9 273 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 DCDC2BA2VCK2 349 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 RPS23P62266 143 aaKnown RBP21.79■■□□□ 1.08
SOX1-201ENST00000330949 FAM3AP98173 230 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 ERN2Q76MJ5 926 aaKnown RBP21.79■■□□□ 1.08
SOX1-201ENST00000330949 C19orf47Q8N9M1 422 aaKnown RBP21.79■■□□□ 1.08
SOX1-201ENST00000330949 NKD1Q969G9 470 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 ELOVL3Q9HB03 270 aa21.79■■□□□ 1.08
SOX1-201ENST00000330949 PLA2G2EQ9NZK7 142 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms