RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 C5orf63A6NC05 138 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 IQCF6A8MYZ5 107 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 J3QW42 95 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 GADD45GO95257 159 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 HLA-DPB1P04440 258 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 ACSM4P0C7M7 580 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 IGHV4-38-2P0DP08 117 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 FPR3P25089 353 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 RRM2P31350 389 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 SLC6A6P31641 620 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 SLC6A9P48067 706 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 RGS6P49758 472 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 ESCO2Q56NI9 601 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 LRRC28Q86X40 367 aaPredicted RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 ATG16L2Q8NAA4 619 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 C19orf18Q8NEA5 215 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 OR8G5Q8NG78 346 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 OR9Q2Q8NGE9 314 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 OR10S1Q8NGN2 331 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 TAF15Q92804 592 aaKnown RBP eCLIP10.35□□□□□ -0.75
TPM3-204ENST00000323144 POP5Q969H6 163 aaKnown RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 APOBEC3DQ96AK3 386 aaPredicted RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 CMTM5Q96DZ9 223 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 JMJD8Q96S16 334 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 IFT27Q9BW83 186 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 EGLN3Q9H6Z9 239 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 KRCC1Q9NPI7 259 aaPredicted RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 MRPL22Q9NWU5 206 aaKnown RBP10.35□□□□□ -0.75
TPM3-204ENST00000323144 OR5V1Q9UGF6 321 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 MAGEL2Q9UJ55 1249 aa10.35□□□□□ -0.75
TPM3-204ENST00000323144 PPIAL4EA0A075B759 164 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PPIAL4CA0A0B4J2A2 164 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PPIAL4DF5H284 164 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 NDUFAB1O14561 156 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 SURF4O15260 269 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 OR10H3O60404 316 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 RENP00797 406 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 ATP6V1B2P21281 511 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PRDX6P30041 224 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PYCR1P32322 319 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 GGT2P36268 569 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PMELP40967 661 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PAX2Q02962 417 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 TRAP1Q12931 704 aaKnown RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 KRT72Q14CN4 511 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 CLEC12AQ5QGZ9 265 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PRAMEF6Q5VXH4 476 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PGBD2Q6P3X8 592 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 PGM2L1Q6PCE3 622 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 DOK3Q7L591 496 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 KLBQ86Z14 1044 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 MUC20Q8N307 709 aaPredicted RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 PARP8Q8N3A8 854 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 C3orf56Q8N813 242 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 OR8D4Q8NGM9 314 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 DACT3Q96B18 629 aaPredicted RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 MAP6Q96JE9 813 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 COG8Q96MW5 612 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 ATF6BQ99941 703 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 SLC30A2Q9BRI3 323 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 MRI1Q9BV20 369 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 SSBP3Q9BWW4 388 aaPredicted RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 SRA1Q9HD15 236 aaKnown RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 NUP50Q9UKX7 468 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 B9D1Q9UPM9 204 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 LRCH1Q9Y2L9 728 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 POLR3KQ9Y2Y1 108 aaPredicted RBP10.34□□□□□ -0.75
TPM3-204ENST00000323144 AUP1Q9Y679 476 aa10.34□□□□□ -0.75
TPM3-204ENST00000323144 IGHV2-70DA0A0C4DH43 119 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 A0A1B0GWJ7 208 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 ARPC3O15145 178 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 FABP3P05413 133 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 HSD17B1P14061 328 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 EGR1P18146 543 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 TUBG1P23258 451 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 CRABP1P29762 137 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 GSSP48637 474 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.33□□□□□ -0.76
TPM3-204ENST00000323144 GK2Q14410 553 aaPredicted RBP10.33□□□□□ -0.76
TPM3-204ENST00000323144 RFX4Q33E94 735 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 SNAI3Q3KNW1 292 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 SLC35F1Q5T1Q4 408 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 COLCA1Q6ZS62 124 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 NAA40Q86UY6 237 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 ZBTB46Q86UZ6 589 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 PGAM4Q8N0Y7 254 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 CYB561A3Q8NBI2 242 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 GJC3Q8NFK1 279 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 OR2AE1Q8NHA4 323 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 PTP4A1Q93096 173 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 PYURFQ96I23 114 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 NSMCE2Q96MF7 247 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 PITX2Q99697 317 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 TMEM246Q9BRR3 403 aa10.33□□□□□ -0.76
TPM3-204ENST00000323144 BTBD10Q9BSF8 475 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms