RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 LRRC28Q86X40 367 aaPredicted RBP13.13□□□□□ -0.31
FOXR1-201ENST00000317011 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 OR4C15Q8NGM1 316 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 SLC7A6Q92536 515 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 SIGLEC11Q96RL6 698 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 NTN4Q9HB63 628 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 DCAF16Q9NXF7 216 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 PLEK2Q9NYT0 353 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 ASH2LQ9UBL3 628 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 TMCC3Q9ULS5 477 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
FOXR1-201ENST00000317011 IGLV1-36A0A0B4J1U3 117 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 A0A0G2JMP0 313 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 A0A0X1KG70 313 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 SAC3D1A6NKF1 404 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 RER1O15258 196 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
FOXR1-201ENST00000317011 ZFP36P26651 326 aaKnown RBP13.12□□□□□ -0.31
FOXR1-201ENST00000317011 CRABP1P29762 137 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 RPS6KA3P51812 740 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 HMGA2P52926 109 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 TMEM155Q4W5P6 130 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 OTPQ5XKR4 325 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 TMEM179BQ7Z7N9 219 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 OR6V1Q8N148 313 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 OR4M2Q8NGB6 313 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 TSSK2Q96PF2 358 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 DDOQ99489 341 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 OCEL1Q9H607 264 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 TMEM106BQ9NUM4 274 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 LHFPL6Q9Y693 200 aa13.12□□□□□ -0.31
FOXR1-201ENST00000317011 LOC105371242A0A075B767 164 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 SOCS2O14508 198 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 OR10H3O60404 316 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 CCNB2O95067 398 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 DBHP09172 617 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 TNFRSF1AP19438 455 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 GSSP48637 474 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 COMPP49747 757 aaPredicted RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 RGS6P49758 472 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 HILS1P60008 231 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 COX10Q12887 443 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 C1orf94Q6P1W5 598 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 PEG10Q86TG7 708 aaKnown RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 HS3ST5Q8IZT8 346 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 GJC3Q8NFK1 279 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 OR9Q2Q8NGE9 314 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 COQ7Q99807 217 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
FOXR1-201ENST00000317011 PCDHB10Q9UN67 800 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 ARHGAP32A7KAX9 2087 aa13.11□□□□□ -0.31
FOXR1-201ENST00000317011 IDH3BO43837 385 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 FSTL3O95633 263 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 PPP1R3DO95685 299 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 GPANK1O95872 356 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 EPHA1P21709 976 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 CPT2P23786 658 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 FPR3P25089 353 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 RBMXP38159 391 aaKnown RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 SLC6A9P48067 706 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 HNRNPA0Q13151 305 aaKnown RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 OR2Z1Q8NG97 314 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 OR10G2Q8NGC3 310 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 NANPQ8TBE9 248 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 ZNF418Q8TF45 676 aaPredicted RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 GIPC3Q8TF64 312 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 FAM216AQ8WUB2 273 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 DVL3Q92997 716 aaPredicted RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 ERMAPQ96PL5 475 aaPredicted RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 DCLRE1BQ9H816 532 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 NKX1-2Q9UD57 310 aaPredicted RBP13.1□□□□□ -0.31
FOXR1-201ENST00000317011 OAZ3Q9UMX2 235 aa13.1□□□□□ -0.31
FOXR1-201ENST00000317011 F5H0A9 414 aaPredicted RBP13.09□□□□□ -0.31
FOXR1-201ENST00000317011 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 TMEM178BH3BS89 294 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 FOXH1O75593 365 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 SBK2P0C263 348 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 HIST1H1CP16403 213 aaKnown RBP13.09□□□□□ -0.31
FOXR1-201ENST00000317011 TNFSF4P23510 183 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 GK3PQ14409 553 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 HLXQ14774 488 aaPredicted RBP13.09□□□□□ -0.31
FOXR1-201ENST00000317011 MICAQ29983 383 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
FOXR1-201ENST00000317011 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
FOXR1-201ENST00000317011 AQP11Q8NBQ7 271 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms