RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 WIPI1Q5MNZ9 446 aaPredicted RBP6.3□□□□□ -1.4
NPHP1-201ENST00000316534 PDSS1Q5T2R2 415 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 BCL2L15Q5TBC7 163 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 OR7E24Q6IFN5 339 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 OR2W3Q7Z3T1 314 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 YRDCQ86U90 279 aaKnown RBP6.3□□□□□ -1.4
NPHP1-201ENST00000316534 PAQR4Q8N4S7 273 aaPredicted RBP6.3□□□□□ -1.4
NPHP1-201ENST00000316534 OR8B12Q8NGG6 310 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 POM121Q96HA1 1249 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 EXO5Q9H790 373 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 GPR35Q9HC97 309 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 EMC3Q9P0I2 261 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 DHDHQ9UQ10 334 aa6.3□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM269A0A1B0GVZ9 245 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF726A6NNF4 738 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RGS5O15539 181 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 LYRM1O43325 122 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 PFDN1O60925 122 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RPP14O95059 124 aaKnown RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 FREM3P0C091 2139 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 H2BFMP0C1H6 154 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 GSTT2P0CG29 244 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 GSTT2BP0CG30 244 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NAT2P11245 290 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 MAP2K3P46734 347 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RPUSD3Q6P087 351 aaKnown RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 PGAP1Q75T13 922 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 FCRLAQ7L513 359 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 DOK3Q7L591 496 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 SERPINA12Q8IW75 414 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CELF2-AS1Q8N7Q2 184 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF676Q8N7Q3 588 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 Q8NFD4 153 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RFT1Q96AA3 541 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 TCF7L1Q9HCS4 588 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 IKZF2Q9UKS7 526 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NPTNQ9Y639 398 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NAP1L6A6NFF2 107 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 HMX3A6NHT5 357 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 H0YC42 278 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 KLRC4-KLRK1H3BQV0 150 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 BPNT1O95861 308 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NAT1P18440 290 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 MEOX1P50221 254 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 PLA2G7Q13093 441 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 GPR176Q14439 515 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RNPS1Q15287 305 aaKnown RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 PYDC2Q56P42 97 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 LAMTOR1Q6IAA8 161 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 FAM89BQ8N5H3 189 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 OR14L1PQ8NHC6 308 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 AQP3Q92482 292 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 C1QTNF5Q9BXJ0 243 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 HES7Q9BYE0 225 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 HDHD2Q9H0R4 259 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 SLC25A18Q9H1K4 315 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM185BQ9H7F4 350 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 RNF121Q9H920 327 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 EMC7Q9NPA0 242 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 TAS2R4Q9NYW5 299 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CLCF1Q9UBD9 225 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 A0A0B4J203 849 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 SMIM30A4D0T7 59 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NPIPA2E9PIF3 369 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 NPIPA3F8WFD2 350 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 APOC1P02654 83 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CELA3AP09093 270 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 POU3F2P20265 443 aaPredicted RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CDAP32320 146 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 THBS4P35443 961 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 DHODHQ02127 395 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 IL18Q14116 193 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 DPPA2Q7Z7J5 298 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CLEC1AQ8NC01 280 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 UPRTQ96BW1 309 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 ORAI1Q96D31 301 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 ADAT3Q96EY9 351 aaPredicted RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF486Q96H40 463 aaPredicted RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 MYOZ1Q9NP98 299 aaPredicted RBP6.29□□□□□ -1.4
NPHP1-201ENST00000316534 COPZ2Q9P299 210 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 SPRR3Q9UBC9 169 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 CACNG2Q9Y698 323 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 FREM2Q5SZK8 3169 aa6.29□□□□□ -1.4
NPHP1-201ENST00000316534 GOLGA4Q13439 2230 aaKnown RBP6.28□□□□□ -1.4
NPHP1-201ENST00000316534 SPAARA0A1B0GVQ0 90 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 AQP7O14520 342 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 LMX1BO60663 402 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 ECDO95905 644 aaPredicted RBP6.28□□□□□ -1.4
NPHP1-201ENST00000316534 GDF1P27539 372 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 ART1P52961 327 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 RNFT1Q5M7Z0 435 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 DRAM2Q6UX65 266 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 GPX8Q8TED1 209 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF837Q96EG3 531 aaPredicted RBP6.28□□□□□ -1.4
NPHP1-201ENST00000316534 DNAJA3Q96EY1 480 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 SFXN2Q96NB2 322 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 FOXN4Q96NZ1 517 aa6.28□□□□□ -1.4
NPHP1-201ENST00000316534 SCPEP1Q9HB40 452 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms