RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 IFNL4K9M1U5 179 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 RNASE1P07998 156 aaKnown RBP14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 SELEP16581 610 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 PRSS12P56730 875 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 FGD3Q5JSP0 725 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 DPY19L2P2Q6ZN68 376 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 ADCK1Q86TW2 530 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 MOGAT3Q86VF5 341 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 KLBQ86Z14 1044 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 BHLHE23Q8NDY6 225 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 FAM162AQ96A26 154 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 C7orf34Q96L11 122 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 TMEM246Q9BRR3 403 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 NDEL1Q9GZM8 345 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 MS4A7Q9GZW8 240 aaPredicted RBP14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 ZNF696Q9H7X3 374 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 NOTCH1P46531 2555 aa14.6□□□□□ -0.07
EXOSC4-201ENST00000316052 IGLV1-36A0A0B4J1U3 117 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 UNC119BA6NIH7 251 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 IQCF6A8MYZ5 107 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 DIRAS1O95057 198 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 HLA-DPB1P04440 258 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 RPS2P15880 293 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 MDH1P40925 334 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 CENPAP49450 140 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 SRP9P49458 86 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 GYS2P54840 703 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 COLCA1Q6ZS62 124 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 C9orf139Q6ZV77 190 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 OR6V1Q8N148 313 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 PARP8Q8N3A8 854 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 FAM86B1Q8N7N1 296 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 GJC3Q8NFK1 279 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 RAB40AQ8WXH6 277 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 UPRTQ96BW1 309 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 COQ7Q99807 217 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 KCTD14Q9BQ13 255 aaPredicted RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 FUZQ9BT04 418 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 UNKLQ9H9P5 680 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 ZMAT3Q9HA38 289 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 EFCAB1Q9HAE3 211 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 SRA1Q9HD15 236 aaKnown RBP14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 RPS6KA6Q9UK32 745 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 B9D1Q9UPM9 204 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 POLR1DQ9Y2S0 133 aa14.59□□□□□ -0.07
EXOSC4-201ENST00000316052 IGHV2-70DA0A0C4DH43 119 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 A0A1B0GWJ7 208 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 CLDN34H7C241 214 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 PPP1R3DO95685 299 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 PLATP00750 562 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 PPIAL4GP0DN37 164 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 RHCEP18577 417 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 CPT2P23786 658 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 RPS6KA3P51812 740 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 GNB2P62879 340 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 KRTAP27-1Q3LI81 207 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 ZNF404Q494X3 552 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 LEG1Q6P5S2 330 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 LRRN1Q6UXK5 716 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 HACD2Q6Y1H2 254 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 NAA40Q86UY6 237 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 OR52J3Q8NH60 311 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 SLC25A28Q96A46 364 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 DHRS1Q96LJ7 313 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 HDHD2Q9H0R4 259 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 TMEM100Q9NV29 134 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 MIOXQ9UGB7 285 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 AURKCQ9UQB9 309 aa14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 FAM32AQ9Y421 112 aaKnown RBP14.58□□□□□ -0.08
EXOSC4-201ENST00000316052 KIR2DS1A0A191URI9 304 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 MDFIC2A0A1B0GVS7 189 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 CRABP1P29762 137 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 COX10Q12887 443 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 MAB21L1Q13394 359 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 ZNF181Q2M3W8 571 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 SMARCD3Q6STE5 483 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 LYPD2Q6UXB3 125 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 BTNL3Q6UXE8 466 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 CFAP77Q6ZQR2 320 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 LINC00346Q8IVM7 164 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 SLC26A10Q8NG04 563 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 NEIL1Q96FI4 390 aaPredicted RBP14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 ERMAPQ96PL5 475 aaPredicted RBP14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 NMNAT3Q96T66 252 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 CCDC134Q9H6E4 229 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 DCAF13Q9NV06 445 aaKnown RBP14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 ABCD2Q9UBJ2 740 aa14.57□□□□□ -0.08
EXOSC4-201ENST00000316052 FSTL3O95633 263 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 ACSM4P0C7M7 580 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 FPR3P25089 353 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 MTNR1AP48039 350 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 NUDT2P50583 147 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 PSME3P61289 254 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 HOXA4Q00056 320 aaPredicted RBP14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 GK2Q14410 553 aaPredicted RBP14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 GLYATQ6IB77 296 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 SLC18B1Q6NT16 456 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 C19orf18Q8NEA5 215 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
EXOSC4-201ENST00000316052 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms