RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 BCORP1Q8N888 145 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADAMTS18Q8TE60 1221 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 THAP3Q8WTV1 239 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 CCDC107Q8WV48 283 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 MVB12AQ96EY5 273 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 C2orf88Q9BSF0 95 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 LMF2Q9BU23 707 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ALG12Q9BV10 488 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 NXF5Q9H1B4 397 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC17A5Q9NRA2 495 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 UPB1Q9UBR1 384 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ABHD16AO95870 558 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 CD8AP01732 235 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ITGB2P05107 769 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 MUC1P15941 1255 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF28P17035 718 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 PRPS1P60891 318 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 RPS4XP62701 263 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 SORDQ00796 357 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 OC90Q02509 493 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ACY1Q03154 408 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 PEA15Q15121 130 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 NKAIN1Q4KMZ8 207 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 RHBDD2Q6NTF9 364 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 TMEM88Q6PEY1 159 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 KIRREL2Q6UWL6 708 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 REC114Q7Z4M0 266 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 EXD3Q8N9H8 876 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZSCAN1Q8NBB4 408 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZPLD1Q8TCW7 415 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 C2CD4CQ8TF44 421 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 NUDT9Q9BW91 350 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 SEC11CQ9BY50 192 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 Q9N2J8 555 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 TMEM138Q9NPI0 162 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 FRRS1LQ9P0K9 344 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF629Q9UEG4 869 aaPredicted RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 MRM2Q9UI43 246 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 A0A087WUJ7 227 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 IGKV3D-11A0A0A0MRZ8 115 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 TRAV14DV4A0A0A6YYC5 116 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 GPR31O00270 319 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 CTAG2O75638 210 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 SPDEFO95238 335 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 DDAH2O95865 285 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF141Q15928 474 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ACER2Q5QJU3 275 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 MED25Q71SY5 747 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 NAA40Q86UY6 237 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 PPP1R3BQ86XI6 285 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 KCNRGQ8N5I3 272 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 THRSPQ92748 146 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADAD1Q96M93 576 aaKnown RBP9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 SSX3Q99909 188 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ALPK2Q86TB3 2170 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 HSPB2A8KAH6 182 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 TOX3O15405 576 aaPredicted RBP9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC34A2O95436 690 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 APEHP13798 732 aaKnown RBP9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 GTF2F2P13984 249 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ABOP16442 354 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 RBP2P50120 134 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF345Q14585 488 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 MELKQ14680 651 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 HSPB2Q16082 182 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 LIPNQ5VXI9 398 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 C11orf88Q6PI97 169 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 CBLN2Q8IUK8 224 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR51S1Q8NGJ8 323 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF721Q8TF20 911 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 RELTQ969Z4 430 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 C8orf44Q96CB5 159 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 RASD2Q96D21 266 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 Q96M85 177 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 CCNL2Q96S94 520 aaPredicted RBP9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADOQ96SZ5 270 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 EXO5Q9H790 373 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 FKRPQ9H9S5 495 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
APOBEC3F-201ENST00000308521 BLACEA4D250 179 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR4C45A6NMZ5 311 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 NPIPB9F8W1W9 429 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 PSMD9O00233 223 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR2F2O95006 317 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 IGHV2-5P01817 119 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR8G3PP0DMU2 310 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC25A4P12235 298 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 AGAP20933 346 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 PRSS3P35030 304 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADH7P40394 386 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 HTR5AP47898 357 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 SOX2P48431 317 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 RAB5CP51148 216 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 PLA2G7Q13093 441 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 SQSTM1Q13501 440 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR2F1Q13607 317 aa9.24□□□□□ -0.93
APOBEC3F-201ENST00000308521 LY6G6FQ5SQ64 297 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms