RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TEAD3Q99594 435 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 GAL3ST2Q9H3Q3 398 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 OR5V1Q9UGF6 321 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DFFBO76075 338 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 GABRB1P18505 474 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 PIGPP57054 158 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DCDP81605 110 aaKnown RBP11.51□□□□□ -0.57
USP38-201ENST00000307017 TBC1D28Q2M2D7 210 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 SAXO2Q658L1 398 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 WFDC8Q8IUA0 241 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 MUC15Q8N387 334 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 OR10D4PQ8NGN7 298 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 ERGIC1Q969X5 290 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 CTDSP1Q9GZU7 261 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 GAREM1Q9H706 876 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 PSENENQ9NZ42 101 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 A0A1B0GTH9 108 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 NCBP2LA6PVI3 153 aaKnown RBP11.51□□□□□ -0.57
USP38-201ENST00000307017 ARRB2P32121 409 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 ERVFC1-1P60608 527 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 SLCO4C1Q6ZQN7 724 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 DHRS9Q9BPW9 319 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 RIMS4Q9H426 269 aaPredicted RBP11.51□□□□□ -0.57
USP38-201ENST00000307017 ADGRL4Q9HBW9 690 aa11.51□□□□□ -0.57
USP38-201ENST00000307017 BOKQ9UMX3 212 aaPredicted RBP11.51□□□□□ -0.57
USP38-201ENST00000307017 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 RIPPLY1Q0D2K3 151 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 ZNF620Q6ZNG0 422 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 TSLPQ969D9 159 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 GPR84Q9NQS5 396 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 MEIKINA0A087WXM9 373 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 A0A1B0GTL3 188 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 MEOX1P50221 254 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 PCBD1P61457 104 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 BCORP1Q8N888 145 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 UCN3Q969E3 161 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 OR51I2Q9H344 312 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 RAB22AQ9UL26 194 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 A4GNTQ9UNA3 340 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 SLC17A4Q9Y2C5 497 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 NUP205Q92621 2012 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 H3BVH4 76 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 TRIM77I1YAP6 450 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 CER1O95813 267 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 TTRP02766 147 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 HNRNPA1P09651 372 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP38-201ENST00000307017 CSF2RBP32927 897 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 VEGFBP49765 207 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 TAZQ16635 292 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 NCMAPQ5T1S8 102 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 OR11L1Q8NGX0 322 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 MED30Q96HR3 178 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 LCORQ96JN0 433 aaPredicted RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 NUDT9Q9BW91 350 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 HBE1P02100 147 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 CR2P20023 1033 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 FPR3P25089 353 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 SNRPEP62304 92 aaKnown RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 PRDX4Q13162 271 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 OR2A2Q6IF42 318 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 OR6M1Q8NGM8 313 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 AKR7LQ8NHP1 331 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 HINT3Q9NQE9 182 aaKnown RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 FBXL4Q9UKA2 621 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 SLCO1B1Q9Y6L6 691 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 NTN1O95631 604 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 C1orf140Q5VVS0 124 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 NRTNQ99748 197 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 ZNF629Q9UEG4 869 aaPredicted RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 PMS2P2O95744 297 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 HBQ1P09105 142 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 ZNF266Q14584 549 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 FAM122BQ7Z309 247 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 GABRG1Q8N1C3 465 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 ANGPTL6Q8NI99 470 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 C8orf33Q9H7E9 229 aaPredicted RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 SIRT3Q9NTG7 399 aaPredicted RBP11.5□□□□□ -0.57
USP38-201ENST00000307017 MMP24Q9Y5R2 645 aa11.5□□□□□ -0.57
USP38-201ENST00000307017 TOMM20LQ6UXN7 152 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 DPY19L2P2Q6ZN68 376 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 MS4A8Q9BY19 250 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 INPP5EQ9NRR6 644 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 TBC1D29Q9UFV1 150 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 OR4E1P0C645 316 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 ZNF17P17021 662 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 NAT1P18440 290 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 DDOSTP39656 456 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 TIAL1Q01085 375 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP38-201ENST00000307017 IGSF11Q5DX21 431 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 CABLES2Q9BTV7 478 aa11.49□□□□□ -0.57
USP38-201ENST00000307017 SLCO1C1Q9NYB5 712 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms