RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 LRRC61Q9BV99 259 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 NUDT9Q9BW91 350 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 MMP26Q9NRE1 261 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 MSRAQ9UJ68 235 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 GDF2Q9UK05 429 aaPredicted RBP4.84□□□□□ -1.64
VPS50-202ENST00000305866 TCFL5Q9UL49 500 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 HSF4Q9ULV5 492 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 GPR132Q9UNW8 380 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 FLVCR1Q9Y5Y0 555 aa4.84□□□□□ -1.64
VPS50-202ENST00000305866 TRAV36DV7A0A075B6V5 113 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TLCD2A6NGC4 264 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 SCAMP1O15126 338 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 LINC01565O15544 149 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 HTR5AP47898 357 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ARRB1P49407 418 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 CAV2P51636 162 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 RPL18Q07020 188 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 GFOD2Q3B7J2 385 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 RNF212Q495C1 297 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TMEM71Q6P5X7 295 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ZNF546Q86UE3 836 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 C1QL4Q86Z23 238 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 NFAM1Q8NET5 270 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 OR13H1Q8NG92 308 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 OR4S1Q8NGB4 309 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 GRHL3Q8TE85 626 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TMEM106AQ96A25 262 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 OR10C1Q96KK4 312 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TSNAXQ99598 290 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 REPIN1Q9BWE0 567 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 SELENOIQ9C0D9 397 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 PDE7BQ9NP56 450 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 RXFP3Q9NSD7 469 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 A0A0B4J2A0 478 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 MEIS3P1A6NDR6 274 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TMEM200CA6NKL6 621 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 M0QYG6 137 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TERTO14746 1132 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 CA11O75493 328 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 DUS4LO95620 317 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 SEMA4FO95754 770 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 HKR1P10072 659 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ACKR3P25106 362 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 GRPRP30550 384 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 AQP2P41181 271 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 PMPCAQ10713 525 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ELAVL1Q15717 326 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 RAB30Q15771 203 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 C1QL3Q5VWW1 255 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 OR5AS1Q8N127 324 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 C12orf45Q8N5I9 185 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 GVQW1Q8N7I0 195 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 NUDCD2Q8WVJ2 157 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 BSCL2Q96G97 398 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 SPACA7Q96KW9 195 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 HSPA12BQ96MM6 686 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 NECAB3Q96P71 396 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 TMEM185BQ9H7F4 350 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 SEC61A2Q9H9S3 476 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 KLHL1Q9NR64 748 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 METTL1Q9UBP6 276 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 LPAR3Q9UBY5 353 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 SHPKQ9UHJ6 478 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 SLC22A13Q9Y226 551 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 MRPS7Q9Y2R9 242 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 RALGAPA1Q6GYQ0 2036 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 A0A1B0GW64 132 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 FAM171A2A8MVW0 826 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 H0Y8X5 98 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 CCSO14618 274 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ACTR1BP42025 376 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 BLKP51451 505 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 EBPQ15125 230 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 CCDC85BQ15834 202 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 WDR74Q6RFH5 385 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 DHRS11Q6UWP2 260 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 SKA3Q8IX90 412 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TSACCQ96A04 125 aaPredicted RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 NARS2Q96I59 477 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 TXNIPQ9H3M7 391 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 PRDM13Q9H4Q3 707 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 ZNF768Q9H5H4 540 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 PRTFDC1Q9NRG1 225 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 TUBD1Q9UJT1 453 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 B9D1Q9UPM9 204 aa4.83□□□□□ -1.64
VPS50-202ENST00000305866 MRPS33Q9Y291 106 aaKnown RBP4.83□□□□□ -1.64
VPS50-202ENST00000305866 A0A0A6YYC8 382 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 I3L1I5 382 aaPredicted RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 PLPP3O14495 311 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 UTS2O95399 124 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 PLATP00750 562 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 APOC3P02656 99 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 IFNA4P05014 189 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 TBPP20226 339 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 BTF3P20290 206 aaKnown RBP4.82□□□□□ -1.64
VPS50-202ENST00000305866 TACR3P29371 465 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 AVPR2P30518 371 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 HIST1H3AP68431 136 aa4.82□□□□□ -1.64
VPS50-202ENST00000305866 ID2Q02363 134 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms