RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SRSF10O75494 262 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 FARS2O95363 451 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 ISG15P05161 165 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 ACSM4P0C7M7 580 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 BCAP31P51572 246 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 RNASE12Q5GAN4 147 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 LRRTM1Q86UE6 522 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 JAGN1Q8N5M9 183 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 OR51E1Q8TCB6 317 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 CPT1CQ8TCG5 803 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 PPP1R14BQ96C90 147 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 S100A16Q96FQ6 103 aaKnown RBP12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 SCMH1Q96GD3 660 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 WACQ9BTA9 647 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 PLEKHA1Q9HB21 404 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 ACKR4Q9NPB9 350 aa12.8□□□□□ -0.36
SHCBP1-201ENST00000303383 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 FUOMA2VDF0 154 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 MEGF11A6BM72 1044 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 APOC1P02654 83 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 CALCBP10092 127 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 B4GALT1P15291 398 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 ADRA2CP18825 462 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 HYAL4Q2M3T9 481 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 SPTSSAQ969W0 71 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 FGGYQ96C11 551 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF837Q96EG3 531 aaPredicted RBP12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 UPB1Q9UBR1 384 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 STEAP1Q9UHE8 339 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 NUFIP1Q9UHK0 495 aaKnown RBP12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 TTRP02766 147 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 ART1P52961 327 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 PMP22Q01453 160 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 SPOCK1Q08629 439 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 RAB11BQ15907 218 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 BCL2A1Q16548 175 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 PLXDC2Q6UX71 529 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 BAIAP2L2Q6UXY1 529 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 RFT1Q96AA3 541 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 GFI1Q99684 422 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 KCNJ15Q99712 375 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 FOXB1Q99853 325 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 SLCO5A1Q9H2Y9 848 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 TBC1D24Q9ULP9 559 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 CSAG2Q9Y5P2 127 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 HNRNPCP07910 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF133P52736 654 aaPredicted RBP12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 ELFN2Q5R3F8 820 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 GDPD3Q7L5L3 318 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 SYNPRQ8TBG9 265 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 LIPGQ9Y5X9 500 aa12.79□□□□□ -0.36
SHCBP1-201ENST00000303383 EEF1E1O43324 174 aaKnown RBP12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 ENDOGQ14249 297 aaKnown RBP12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 FAM27BQ5VT28 67 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 LINGO2Q7L985 606 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 KRT74Q7RTS7 529 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 SLC16A14Q7RTX9 510 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 NRARPQ7Z6K4 114 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 SERPINA12Q8IW75 414 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 TUSC5Q8IXB3 177 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF100Q8IYN0 542 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 SOSTQ9BQB4 213 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 NCOA6Q14686 2063 aaPredicted RBP12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 SGCEO43556 437 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 UBL3O95164 117 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 FOXC1Q12948 553 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF813Q6ZN06 617 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 P4HA3Q7Z4N8 544 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 IZUMO1Q8IYV9 350 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 NABP1Q96AH0 204 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 CMTM3Q96MX0 182 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 THAP7Q9BT49 309 aaPredicted RBP12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 TMEM38BQ9NVV0 291 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 ETV7Q9Y603 341 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 RTTNQ86VV8 2226 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 NR4A2P43354 598 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 RIPPLY2Q5TAB7 128 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 ZADH2Q8N4Q0 377 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 OR8B12Q8NGG6 310 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 OR5D14Q8NGL3 314 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 OR5V1Q9UGF6 321 aa12.78□□□□□ -0.36
SHCBP1-201ENST00000303383 PCBD1P61457 104 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 ASAH1Q13510 395 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 RIN1Q13671 783 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 SNIP1Q8TAD8 396 aaKnown RBP12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 TMEM45BQ96B21 275 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 GPR84Q9NQS5 396 aa12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.36
SHCBP1-201ENST00000303383 DMXL1Q9Y485 3027 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms